BLASTX nr result

ID: Coptis21_contig00021546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021546
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527293.1| PREDICTED: glutamate receptor 3.3-like [Glyc...   140   8e-32
ref|XP_003596996.1| Glutamate receptor 3.4 [Medicago truncatula]...   140   8e-32
ref|XP_003603849.1| Glutamate-gated kainate-type ion channel rec...   137   1e-30
dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]         136   2e-30
ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinu...   136   2e-30

>ref|XP_003527293.1| PREDICTED: glutamate receptor 3.3-like [Glycine max]
          Length = 929

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/83 (74%), Positives = 70/83 (84%)
 Frame = -1

Query: 251 FDAVVGDIAIVTNRTRIVDLTQPYTDSGLIVVVPFKRLNSGGWSFLRPFTPQLWCVTGAF 72
           FD  +GDIAIVTNRTRIVD TQPY  SGL+VV PFK++NSGGWSFL+PFTP +W VT  F
Sbjct: 541 FDGAIGDIAIVTNRTRIVDFTQPYAASGLVVVAPFKKINSGGWSFLQPFTPLMWIVTACF 600

Query: 71  FLFVGAVVWILEHRHNIEFRGPP 3
           FLF+G V+WILEHR N EFRGPP
Sbjct: 601 FLFIGIVIWILEHRINDEFRGPP 623


>ref|XP_003596996.1| Glutamate receptor 3.4 [Medicago truncatula]
           gi|355486044|gb|AES67247.1| Glutamate receptor 3.4
           [Medicago truncatula]
          Length = 931

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/83 (74%), Positives = 71/83 (85%)
 Frame = -1

Query: 251 FDAVVGDIAIVTNRTRIVDLTQPYTDSGLIVVVPFKRLNSGGWSFLRPFTPQLWCVTGAF 72
           FDA VGD+ IV NRTRI+D TQP+ +SGL+VVVP K + S  W+FL+PFT Q+WCVTGAF
Sbjct: 543 FDAAVGDVTIVPNRTRILDFTQPFMESGLVVVVPVKEIKSSPWAFLKPFTAQMWCVTGAF 602

Query: 71  FLFVGAVVWILEHRHNIEFRGPP 3
           FLFVGAVVWILEHRHN EFRGPP
Sbjct: 603 FLFVGAVVWILEHRHNPEFRGPP 625


>ref|XP_003603849.1| Glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Medicago truncatula] gi|355492897|gb|AES74100.1|
           Glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Medicago truncatula]
          Length = 914

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/83 (75%), Positives = 68/83 (81%)
 Frame = -1

Query: 251 FDAVVGDIAIVTNRTRIVDLTQPYTDSGLIVVVPFKRLNSGGWSFLRPFTPQLWCVTGAF 72
           FD  VGDIAIVTNRTRIVD TQPY  SGL+VV PFK++NSGGWSFL+PFTP +W VT  F
Sbjct: 536 FDGAVGDIAIVTNRTRIVDFTQPYAASGLVVVAPFKKINSGGWSFLQPFTPFMWIVTACF 595

Query: 71  FLFVGAVVWILEHRHNIEFRGPP 3
           F FVG VVWILEHR N EFRG P
Sbjct: 596 FFFVGIVVWILEHRVNDEFRGSP 618


>dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]
          Length = 808

 Score =  136 bits (343), Expect = 2e-30
 Identities = 63/83 (75%), Positives = 70/83 (84%)
 Frame = -1

Query: 251 FDAVVGDIAIVTNRTRIVDLTQPYTDSGLIVVVPFKRLNSGGWSFLRPFTPQLWCVTGAF 72
           FD VVGDIAIVTNRTR+VD TQPY  SGL+VV PF++LNSGGW+FLRPF+ Q+W V   F
Sbjct: 543 FDGVVGDIAIVTNRTRVVDFTQPYAASGLVVVAPFEKLNSGGWAFLRPFSAQMWGVITIF 602

Query: 71  FLFVGAVVWILEHRHNIEFRGPP 3
           FLFVG VVWILEHR N EFRGPP
Sbjct: 603 FLFVGMVVWILEHRINDEFRGPP 625


>ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 924

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/83 (74%), Positives = 69/83 (83%)
 Frame = -1

Query: 251 FDAVVGDIAIVTNRTRIVDLTQPYTDSGLIVVVPFKRLNSGGWSFLRPFTPQLWCVTGAF 72
           FD V+GDIAIVTNRTR+VD TQPY +SGL+VV P K+LNS  W+FLRPFTP +W VT  F
Sbjct: 532 FDGVIGDIAIVTNRTRVVDFTQPYIESGLVVVAPVKKLNSNEWAFLRPFTPWMWAVTAIF 591

Query: 71  FLFVGAVVWILEHRHNIEFRGPP 3
           FL VGAVVWILEHR N EFRGPP
Sbjct: 592 FLLVGAVVWILEHRINDEFRGPP 614


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