BLASTX nr result

ID: Coptis21_contig00021545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021545
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266049.1| PREDICTED: uncharacterized protein LOC100245...   288   1e-75
ref|XP_002305647.1| predicted protein [Populus trichocarpa] gi|2...   270   3e-70
ref|XP_002281638.1| PREDICTED: uncharacterized protein LOC100243...   268   1e-69
emb|CAN81932.1| hypothetical protein VITISV_041503 [Vitis vinifera]   268   1e-69
ref|XP_002316667.1| predicted protein [Populus trichocarpa] gi|2...   265   7e-69

>ref|XP_002266049.1| PREDICTED: uncharacterized protein LOC100245492 [Vitis vinifera]
          Length = 362

 Score =  288 bits (736), Expect = 1e-75
 Identities = 164/290 (56%), Positives = 193/290 (66%), Gaps = 10/290 (3%)
 Frame = +3

Query: 3   HGSWRTLPKNADLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIA 182
           +G+WRTLPKNA LQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIA
Sbjct: 34  YGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIA 93

Query: 183 ARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHXXXXXXXXXXXXXXXXXXXXXXXXXXR 362
           ARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTH                          R
Sbjct: 94  ARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSILSTSLYNSSHMNVSR 153

Query: 363 LLGIQHVVNPEILRLATSLLSSQRANQECIRQNHQENQLYNSQVHDQFG--VQPVQLQPP 536
            LG+Q +VNPE+LRLATSL+SSQR N   + QN QENQL N+QV + F   VQP Q+Q P
Sbjct: 154 FLGMQPLVNPELLRLATSLMSSQRENPNFLLQNVQENQLCNAQVQNSFTHLVQPNQIQTP 213

Query: 537 SQENVTCTTPSIHCTPFLDDAQLMQANVEQFQTSPTSFSYQNTE-PTVWEQNA----EGI 701
            QE   C   S   + F +++Q+M+ N EQF ++ T FS QN++  + W+ N        
Sbjct: 214 IQEIPACNPLS---SSFSNESQVMEPNAEQFPSNITDFSSQNSQLISDWQSNGLPSDLSE 270

Query: 702 EDYAPQ-LDYGYF--NQSIVDLLNENQNIDSNDNQNFSVPSVLSVGETIP 842
           E Y P     GY+   Q+I+D  ++N    SN+  NFS  SVLS   + P
Sbjct: 271 EYYVPHPSSVGYYGSEQTIMDPSSDNSVFQSNN--NFSFASVLSTPSSSP 318


>ref|XP_002305647.1| predicted protein [Populus trichocarpa] gi|222848611|gb|EEE86158.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  270 bits (690), Expect = 3e-70
 Identities = 159/302 (52%), Positives = 187/302 (61%), Gaps = 22/302 (7%)
 Frame = +3

Query: 3   HGSWRTLPKNADLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIA 182
           +G+WRTLPKNA LQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIA
Sbjct: 34  YGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIA 93

Query: 183 ARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTH-XXXXXXXXXXXXXXXXXXXXXXXXXX 359
           ARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTH                           
Sbjct: 94  ARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSILSSSLYNSSDQMNMS 153

Query: 360 RLLGIQHVVNPEILRLATSLLSSQR-ANQECIRQNHQEN------QLYNSQVHDQFGVQP 518
           R+LG+  +VNP +LRLATSLLSSQR   Q  + QN QE       Q+  SQ         
Sbjct: 154 RMLGVPPLVNPGLLRLATSLLSSQRDQTQNFVIQNGQEENHLPNPQVQQSQYESMIHQAN 213

Query: 519 VQLQPPSQENVTCTT-PSIHCTPFLDDAQLMQANVEQFQTSP-TSFSYQNTEPTV---WE 683
           +Q Q P QE  TCTT  +  C  F ++A++M  NV+Q+Q+S  T+FS  N++ +    W+
Sbjct: 214 IQFQTPGQEMPTCTTLTTSPCVTFSNEARIMDPNVDQYQSSTITNFSSPNSQFSTHDQWQ 273

Query: 684 QNAEG---IEDY-----APQLDYGYFNQSIVDLLNENQNIDSN-DNQNFSVPSVLSVGET 836
            N  G    EDY     +     GY+   ++D  +E     SN  NQNF   SVLS   +
Sbjct: 274 NNGMGSNLAEDYYVPAVSSYNSNGYYGSDLMDPSSETSTFISNSSNQNFGFASVLSTPSS 333

Query: 837 IP 842
            P
Sbjct: 334 SP 335


>ref|XP_002281638.1| PREDICTED: uncharacterized protein LOC100243528 [Vitis vinifera]
          Length = 361

 Score =  268 bits (684), Expect = 1e-69
 Identities = 152/281 (54%), Positives = 170/281 (60%), Gaps = 7/281 (2%)
 Frame = +3

Query: 3   HGSWRTLPKNADLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIA 182
           HG WRTLPKNA L+RCGKSCRLRWTNYLRPDIKRGRFSFEEEE IIQLH ILGNKWSAIA
Sbjct: 34  HGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGRFSFEEEEAIIQLHGILGNKWSAIA 93

Query: 183 ARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHXXXXXXXXXXXXXXXXXXXXXXXXXXR 362
           ARLPGRTDNEIKNYWNT IRK+LLRMGIDPVTH                           
Sbjct: 94  ARLPGRTDNEIKNYWNTRIRKKLLRMGIDPVTHAPRMDLLELASLLGSSLYNSSLQLNVP 153

Query: 363 L--LGIQHVVNPEILRLATSLLSSQRANQECIRQNHQENQLYNSQVHDQF-GVQPVQLQP 533
              LG+  +VN ++L LAT+LLSS   N E   QN  ENQL N QV +QF   Q   LQ 
Sbjct: 154 AGSLGMGPMVNDDVLTLATALLSSHCENPELQLQNLLENQLRNPQVQNQFESFQGNNLQS 213

Query: 534 PSQENVTCTTPSIHCTPFLDDAQLMQANVEQFQTSPTSFSYQNTEPTVWEQNA----EGI 701
             QE   C T S   TPFL++ QLMQA  E    +PT F+YQN+ P +W+ +        
Sbjct: 214 SIQEVQACPTSSAASTPFLNETQLMQAIAEHLSQNPTDFAYQNSLPNLWQVHGGHPITAA 273

Query: 702 EDYAPQLDYGYFNQSIVDLLNENQNIDSNDNQNFSVPSVLS 824
               P L +     SI        N  SN+ QNFS  SVLS
Sbjct: 274 SFTNPTLSFDSIPSSITGHQTLKSNAVSNNTQNFSFDSVLS 314


>emb|CAN81932.1| hypothetical protein VITISV_041503 [Vitis vinifera]
          Length = 335

 Score =  268 bits (684), Expect = 1e-69
 Identities = 152/281 (54%), Positives = 170/281 (60%), Gaps = 7/281 (2%)
 Frame = +3

Query: 3   HGSWRTLPKNADLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIA 182
           HG WRTLPKNA L+RCGKSCRLRWTNYLRPDIKRGRFSFEEEE IIQLH ILGNKWSAIA
Sbjct: 34  HGRWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGRFSFEEEEAIIQLHGILGNKWSAIA 93

Query: 183 ARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHXXXXXXXXXXXXXXXXXXXXXXXXXXR 362
           ARLPGRTDNEIKNYWNT IRK+LLRMGIDPVTH                           
Sbjct: 94  ARLPGRTDNEIKNYWNTRIRKKLLRMGIDPVTHAPRMDLLELASLLGSSLYNSSLQLNVP 153

Query: 363 L--LGIQHVVNPEILRLATSLLSSQRANQECIRQNHQENQLYNSQVHDQF-GVQPVQLQP 533
              LG+  +VN ++L LAT+LLSS   N E   QN  ENQL N QV +QF   Q   LQ 
Sbjct: 154 AGSLGMGPMVNDDVLTLATALLSSHCENPELQLQNLLENQLRNPQVQNQFESFQGNNLQS 213

Query: 534 PSQENVTCTTPSIHCTPFLDDAQLMQANVEQFQTSPTSFSYQNTEPTVWEQNA----EGI 701
             QE   C T S   TPFL++ QLMQA  E    +PT F+YQN+ P +W+ +        
Sbjct: 214 SIQEVQACPTSSAASTPFLNETQLMQAIAEHLSQNPTDFAYQNSLPNLWQVHGGHPITAA 273

Query: 702 EDYAPQLDYGYFNQSIVDLLNENQNIDSNDNQNFSVPSVLS 824
               P L +     SI        N  SN+ QNFS  SVLS
Sbjct: 274 SFTNPTLSFDSIPSSITGHQTLKSNAVSNNTQNFSFDSVLS 314


>ref|XP_002316667.1| predicted protein [Populus trichocarpa] gi|222859732|gb|EEE97279.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  265 bits (678), Expect = 7e-69
 Identities = 160/301 (53%), Positives = 184/301 (61%), Gaps = 21/301 (6%)
 Frame = +3

Query: 3   HGSWRTLPKNADLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIA 182
           +G+WRTLPKNA LQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLH ILGNKWSAIA
Sbjct: 34  YGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHGILGNKWSAIA 93

Query: 183 ARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHXXXXXXXXXXXXXXXXXXXXXXXXXXR 362
           ARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTH                          R
Sbjct: 94  ARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTH-SPRLDLLDLSSILNSPLYDSRMNMSR 152

Query: 363 LLGIQHVVNPEILRLATSLLSSQRANQE--CIRQNHQENQLYNSQV----HDQFGVQPVQ 524
           +LG+Q + +PE+LRLATSLLSSQR   +   I+  HQEN L + QV    H     Q  Q
Sbjct: 153 VLGVQPLGDPELLRLATSLLSSQRDQTQDFAIQNGHQENHLSSPQVHQSQHQSIIHQANQ 212

Query: 525 LQPPSQENVTCTT-PSIHCTPFLDDAQLMQANVEQFQTSP-TSFSYQNTEPTV---WEQN 689
            Q P QE  TCTT  +  C  F ++AQ M  NV+Q+Q S  TSFS  N++ +    W+ N
Sbjct: 213 FQTPGQEMPTCTTLTTTPCVTFSNEAQQMDPNVDQYQLSTITSFSSPNSQLSTHDQWQSN 272

Query: 690 AEG---IEDYAPQLDYGY------FNQSIVDLLNENQN-IDSNDNQNFSVPSVLSVGETI 839
             G    +DY       Y          +VD  +E    I +N NQ F   SVLS   + 
Sbjct: 273 RMGSNLSQDYYLPAVSSYNSADNCHGTDLVDPSSEASTFISNNSNQTFGFASVLSTPSSS 332

Query: 840 P 842
           P
Sbjct: 333 P 333


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