BLASTX nr result

ID: Coptis21_contig00021544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021544
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK61851.1| hypothetical protein [Citrus unshiu]                   74   9e-12
ref|XP_002324779.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
emb|CBI20701.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002516114.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|XP_003603187.1| hypothetical protein MTR_3g104820 [Medicago ...    56   3e-06

>dbj|BAK61851.1| hypothetical protein [Citrus unshiu]
          Length = 381

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/87 (49%), Positives = 52/87 (59%)
 Frame = -1

Query: 266 FETNTSIQPMSMLL*NAKKSRTVVNVSEKGFRXXXXXXXXXXXXGTYLPDQRSTVVSSIL 87
           FE  T +Q MS         R VVNV  +GFR             TYLPDQRS V+SS+L
Sbjct: 115 FEQCTELQEMS---------RKVVNVDGRGFRKQGVKYDWKMKVDTYLPDQRSPVISSVL 165

Query: 86  FLPLPGEHTIGSTTSRSMAWFAAAGSS 6
           F PL GE++I +TT+R MAWF+AA SS
Sbjct: 166 FPPLQGENSIEATTARCMAWFSAAVSS 192


>ref|XP_002324779.1| predicted protein [Populus trichocarpa] gi|222866213|gb|EEF03344.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/68 (54%), Positives = 43/68 (63%)
 Frame = -1

Query: 209 SRTVVNVSEKGFRXXXXXXXXXXXXGTYLPDQRSTVVSSILFLPLPGEHTIGSTTSRSMA 30
           SR VVN+    F               YLPDQRS+VVSSILF+PL GEH+I +TT R MA
Sbjct: 135 SRKVVNMDSWAFSKRGVKYDWKMKVDNYLPDQRSSVVSSILFMPLQGEHSIEATTGRCMA 194

Query: 29  WFAAAGSS 6
           WF+AA SS
Sbjct: 195 WFSAAVSS 202


>emb|CBI20701.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/68 (52%), Positives = 46/68 (67%)
 Frame = -1

Query: 209 SRTVVNVSEKGFRXXXXXXXXXXXXGTYLPDQRSTVVSSILFLPLPGEHTIGSTTSRSMA 30
           SR VVN+  + F             GT+LP  RSTVVSSILF+PL GE+++ +TT+RSMA
Sbjct: 139 SRRVVNMDYRVFNQKGVNYDWKMKVGTFLPLPRSTVVSSILFMPLVGENSVEATTARSMA 198

Query: 29  WFAAAGSS 6
           WF+AA SS
Sbjct: 199 WFSAAVSS 206


>ref|XP_002516114.1| conserved hypothetical protein [Ricinus communis]
           gi|223544600|gb|EEF46116.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 389

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/68 (45%), Positives = 44/68 (64%)
 Frame = -1

Query: 209 SRTVVNVSEKGFRXXXXXXXXXXXXGTYLPDQRSTVVSSILFLPLPGEHTIGSTTSRSMA 30
           SR VV V+ + F               YLPD+ S+++SSILFLP+ GE+++ +TT+R MA
Sbjct: 134 SRRVVGVNCRAFSKKEVKYDWRLKMEAYLPDRNSSIISSILFLPMQGEYSVEATTARCMA 193

Query: 29  WFAAAGSS 6
           WF+AA SS
Sbjct: 194 WFSAAVSS 201


>ref|XP_003603187.1| hypothetical protein MTR_3g104820 [Medicago truncatula]
           gi|355492235|gb|AES73438.1| hypothetical protein
           MTR_3g104820 [Medicago truncatula]
          Length = 381

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/68 (44%), Positives = 42/68 (61%)
 Frame = -1

Query: 209 SRTVVNVSEKGFRXXXXXXXXXXXXGTYLPDQRSTVVSSILFLPLPGEHTIGSTTSRSMA 30
           +R V+++  + F             G+YLP Q S+VVSSILF+PL  E+ I +TT+R M 
Sbjct: 129 TRRVMHIQARRFHEDAIKYDWKMKVGSYLPHQSSSVVSSILFMPLVSENCINTTTARCMT 188

Query: 29  WFAAAGSS 6
           WF+AA SS
Sbjct: 189 WFSAAISS 196


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