BLASTX nr result

ID: Coptis21_contig00021531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021531
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45476.1| unknown [Medicago truncatula]                          164   9e-39
ref|XP_002301080.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002283933.2| PREDICTED: uncharacterized protein LOC100267...   160   8e-38
emb|CBI19229.3| unnamed protein product [Vitis vinifera]              160   8e-38
emb|CAN80597.1| hypothetical protein VITISV_002641 [Vitis vinifera]   160   8e-38

>gb|AFK45476.1| unknown [Medicago truncatula]
          Length = 541

 Score =  164 bits (414), Expect = 9e-39
 Identities = 86/144 (59%), Positives = 101/144 (70%), Gaps = 6/144 (4%)
 Frame = +2

Query: 11  FSIPNSPSPFLPFHNHYPTRSSP--LQYS----LKXXXXXXXXXXIRGMADNNNSNSDTV 172
           ++I NSPS  +  HN++ T   P  LQ+     L+                 +N +SD+V
Sbjct: 25  YNITNSPS-LIHNHNYFSTNHKPPFLQFFSGILLRPTIGSFSTTITSSSKTMSNFDSDSV 83

Query: 173 TYLSAKEAAQIDQLLMGPLGFSVDQLMELAGLSVATSIAEVYKPSEYKRVLAICGPGNNG 352
           TYL  +EA +ID+ LMGPLGFSVDQLMELAGLSVATSI EVYKP EY RVL ICGPGNNG
Sbjct: 84  TYLKQQEAVEIDETLMGPLGFSVDQLMELAGLSVATSIYEVYKPGEYSRVLTICGPGNNG 143

Query: 353 GDGLVAARHLYHFGYKPCICYPKR 424
           GDGLVAARHL+HFGYKP +CYPKR
Sbjct: 144 GDGLVAARHLHHFGYKPLVCYPKR 167


>ref|XP_002301080.1| predicted protein [Populus trichocarpa] gi|222842806|gb|EEE80353.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score =  162 bits (409), Expect = 3e-38
 Identities = 73/89 (82%), Positives = 85/89 (95%)
 Frame = +2

Query: 158 NSDTVTYLSAKEAAQIDQLLMGPLGFSVDQLMELAGLSVATSIAEVYKPSEYKRVLAICG 337
           N ++++YL+ +EAA++D++LMGPLGFSVDQLMELAGLSVATSIAEVYKPSEY RVLAICG
Sbjct: 3   NPESISYLTQREAAEVDEILMGPLGFSVDQLMELAGLSVATSIAEVYKPSEYSRVLAICG 62

Query: 338 PGNNGGDGLVAARHLYHFGYKPCICYPKR 424
           PGNNGGDGLVAARHL+HFGYKP +CYPKR
Sbjct: 63  PGNNGGDGLVAARHLHHFGYKPSVCYPKR 91


>ref|XP_002283933.2| PREDICTED: uncharacterized protein LOC100267813 [Vitis vinifera]
          Length = 533

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/89 (84%), Positives = 83/89 (93%)
 Frame = +2

Query: 158 NSDTVTYLSAKEAAQIDQLLMGPLGFSVDQLMELAGLSVATSIAEVYKPSEYKRVLAICG 337
           N D+++YL  +EAA+ID+ LMGPLGFSVDQLMELAGLSVATSIAEVY+PSEY RVLAICG
Sbjct: 72  NQDSISYLLQREAAEIDETLMGPLGFSVDQLMELAGLSVATSIAEVYRPSEYNRVLAICG 131

Query: 338 PGNNGGDGLVAARHLYHFGYKPCICYPKR 424
           PGNNGGDGLVAARHL+HFGYKP ICYPKR
Sbjct: 132 PGNNGGDGLVAARHLHHFGYKPYICYPKR 160


>emb|CBI19229.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/89 (84%), Positives = 83/89 (93%)
 Frame = +2

Query: 158 NSDTVTYLSAKEAAQIDQLLMGPLGFSVDQLMELAGLSVATSIAEVYKPSEYKRVLAICG 337
           N D+++YL  +EAA+ID+ LMGPLGFSVDQLMELAGLSVATSIAEVY+PSEY RVLAICG
Sbjct: 62  NQDSISYLLQREAAEIDETLMGPLGFSVDQLMELAGLSVATSIAEVYRPSEYNRVLAICG 121

Query: 338 PGNNGGDGLVAARHLYHFGYKPCICYPKR 424
           PGNNGGDGLVAARHL+HFGYKP ICYPKR
Sbjct: 122 PGNNGGDGLVAARHLHHFGYKPYICYPKR 150


>emb|CAN80597.1| hypothetical protein VITISV_002641 [Vitis vinifera]
          Length = 787

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/89 (84%), Positives = 83/89 (93%)
 Frame = +2

Query: 158 NSDTVTYLSAKEAAQIDQLLMGPLGFSVDQLMELAGLSVATSIAEVYKPSEYKRVLAICG 337
           N D+++YL  +EAA+ID+ LMGPLGFSVDQLMELAGLSVATSIAEVY+PSEY RVLAICG
Sbjct: 377 NQDSISYLLQREAAEIDETLMGPLGFSVDQLMELAGLSVATSIAEVYRPSEYNRVLAICG 436

Query: 338 PGNNGGDGLVAARHLYHFGYKPCICYPKR 424
           PGNNGGDGLVAARHL+HFGYKP ICYPKR
Sbjct: 437 PGNNGGDGLVAARHLHHFGYKPYICYPKR 465


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