BLASTX nr result

ID: Coptis21_contig00021528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021528
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304279.1| mtn21-like protein [Populus trichocarpa] gi|...   178   2e-57
ref|XP_004147210.1| PREDICTED: auxin-induced protein 5NG4-like [...   178   1e-56
gb|ABD64979.1| integral membrane protein, putative [Brassica ole...   171   5e-55
gb|ABD65007.1| integral membrane protein, putative [Brassica ole...   172   2e-54
gb|AFK40368.1| unknown [Lotus japonicus]                              172   2e-54

>ref|XP_002304279.1| mtn21-like protein [Populus trichocarpa]
           gi|222841711|gb|EEE79258.1| mtn21-like protein [Populus
           trichocarpa]
          Length = 352

 Score =  178 bits (451), Expect(2) = 2e-57
 Identities = 95/203 (46%), Positives = 128/203 (63%), Gaps = 3/203 (1%)
 Frame = +3

Query: 249 VRFEKVDLKCFYSWVKIMGTMLCIVGXXXXXXXXXXXXXXXPLKTASNME---TFNQDRI 419
           +R EKV L C YS VKI+GT+LC+VG                  + S      +F++ +I
Sbjct: 127 LRLEKVKLCCVYSKVKIVGTILCVVGALMMSLMSSTESAKESKSSESTPPGDMSFDKHKI 186

Query: 420 IGTVCLLAGVIILSFNTILQAITLRDFPAPTSLNAITSIVGAVLTIFLQLIVEHGLEIGP 599
            G + L+A V +LS N +LQA TL DFPAP SL AITS++G ++T  ++L++ H +++G 
Sbjct: 187 NGCLYLIAAVFVLSSNVVLQATTLGDFPAPISLCAITSLIGVIITAIVELVLNHRVDVGW 246

Query: 600 PYVSARKLVGYALLGGVVPGAYGSFQAWAMKKKGPVFVSTVSPIGTVFSVVISALTLKDS 779
           P +    L+ Y++LGG V GA  SF  WAMKK+GPV V+  +PIGTV SVV S +TL D 
Sbjct: 247 PLMRLGTLICYSILGGAVGGACVSFNGWAMKKRGPVHVAVFNPIGTVISVVFSVITLGDR 306

Query: 780 ITSTSLIGMFLIFGGLYSVLWAK 848
               SL GMFL+F GLY VLWAK
Sbjct: 307 FNLASLAGMFLMFTGLYFVLWAK 329



 Score = 71.6 bits (174), Expect(2) = 2e-57
 Identities = 34/54 (62%), Positives = 42/54 (77%)
 Frame = +1

Query: 1   PRRFSLKLLGQFLLISFAGIILFQALMLIGVKKTSPALGSVMPNLAPGFIFIIA 162
           P+ F LKL+ Q +LISF G+ LFQ+L L G+K TSPA+ + MPNLAPG IFIIA
Sbjct: 71  PKEFRLKLMIQLVLISFGGVTLFQSLFLKGIKLTSPAMATAMPNLAPGLIFIIA 124


>ref|XP_004147210.1| PREDICTED: auxin-induced protein 5NG4-like [Cucumis sativus]
           gi|449504972|ref|XP_004162344.1| PREDICTED:
           auxin-induced protein 5NG4-like [Cucumis sativus]
          Length = 351

 Score =  178 bits (452), Expect(2) = 1e-56
 Identities = 96/208 (46%), Positives = 131/208 (62%), Gaps = 7/208 (3%)
 Frame = +3

Query: 246 WV-RFEKVDLKCFYSWVKIMGTMLCIVGXXXXXXXXXXXXXXX-----PLKTASNMETFN 407
           W+ R EKV L C YS +KI+GT+LC++G                    P ++  + + F+
Sbjct: 121 WIFRLEKVQLSCIYSKIKILGTLLCVIGAFTMSIMHSAPSDVAGKNSIPQQSPLSEQLFD 180

Query: 408 QDRIIGTVCLLAGVIILSFNTILQAITLRDFPAPTSLNAITSIVGAVLTIFLQLIVEHGL 587
           + +I+G   L   +IILS   +LQA TL DFPAP SL AITS++G +LTI +Q+I  H +
Sbjct: 181 EQKILGCAYLFVAIIILSCIVVLQAATLGDFPAPMSLCAITSLIGVLLTIGVQIIQYHRI 240

Query: 588 EIG-PPYVSARKLVGYALLGGVVPGAYGSFQAWAMKKKGPVFVSTVSPIGTVFSVVISAL 764
           +I  P  +  ++L  Y +LGG + GA  SF  WAMKK+GPV VS  SPIGTV S+V+S +
Sbjct: 241 DIAWPLLIGVKELAAYVILGGTISGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLVLSVI 300

Query: 765 TLKDSITSTSLIGMFLIFGGLYSVLWAK 848
           TL +SI   SL GMF++F GLY VLWAK
Sbjct: 301 TLGESINIGSLAGMFMMFTGLYFVLWAK 328



 Score = 68.6 bits (166), Expect(2) = 1e-56
 Identities = 32/54 (59%), Positives = 42/54 (77%)
 Frame = +1

Query: 1   PRRFSLKLLGQFLLISFAGIILFQALMLIGVKKTSPALGSVMPNLAPGFIFIIA 162
           P++ SLKL+ Q +LISF G+ LFQ+L+L G++ TSP L + MPNLAPG IF IA
Sbjct: 67  PKKLSLKLILQLVLISFGGVTLFQSLLLKGIQLTSPTLATAMPNLAPGLIFAIA 120


>gb|ABD64979.1| integral membrane protein, putative [Brassica oleracea]
          Length = 345

 Score =  171 bits (432), Expect(2) = 5e-55
 Identities = 94/201 (46%), Positives = 129/201 (64%), Gaps = 1/201 (0%)
 Frame = +3

Query: 249 VRFEKVDLKCFYSWVKIMGTMLCIVGXXXXXXXXXXXXXXXPLKTASNMETFNQDRIIGT 428
           VR EK+++KC YS +KI+GT+LC+ G                   AS +  F++DR++G 
Sbjct: 123 VRLEKMNMKCVYSKLKILGTLLCVFGALTMSLMHSASIIQDEKDNAS-IFVFDRDRVVGC 181

Query: 429 VCLLAGVIILSFNTILQAITLRDFPAPTSLNAITSIVGAVLTIFLQLIV-EHGLEIGPPY 605
           + LL  V +LS N +LQA TL +FPAP SL+AIT+++G ++T+ +QL+  + G  +    
Sbjct: 182 IYLLGAVFVLSTNVVLQASTLAEFPAPISLSAITALIGVLITMLVQLLQNQSGKVLTRSL 241

Query: 606 VSARKLVGYALLGGVVPGAYGSFQAWAMKKKGPVFVSTVSPIGTVFSVVISALTLKDSIT 785
           +S   LVG++LLGG+V GA  SF  WAMKK+GPV VS  SP  TV SV  S LTL +SI 
Sbjct: 242 ISIGNLVGFSLLGGMVSGACVSFNGWAMKKRGPVMVSMFSPFATVISVGFSVLTLGESIC 301

Query: 786 STSLIGMFLIFGGLYSVLWAK 848
             S+ GM L+F GLY VLWAK
Sbjct: 302 LGSVGGMALMFMGLYLVLWAK 322



 Score = 70.9 bits (172), Expect(2) = 5e-55
 Identities = 32/57 (56%), Positives = 44/57 (77%)
 Frame = +1

Query: 1   PRRFSLKLLGQFLLISFAGIILFQALMLIGVKKTSPALGSVMPNLAPGFIFIIASVV 171
           P+  S +L+G+ +LISFAG+ LFQ+L L G++ TSPA+ + MPNLAPG IF IA +V
Sbjct: 67  PKELSARLIGKLVLISFAGVTLFQSLFLEGIRLTSPAMATAMPNLAPGLIFFIAWIV 123


>gb|ABD65007.1| integral membrane protein, putative [Brassica oleracea]
          Length = 376

 Score =  172 bits (436), Expect(2) = 2e-54
 Identities = 96/201 (47%), Positives = 128/201 (63%), Gaps = 1/201 (0%)
 Frame = +3

Query: 249 VRFEKVDLKCFYSWVKIMGTMLCIVGXXXXXXXXXXXXXXXPLKTASNMETFNQDRIIGT 428
           VR EK+D+KC YS +KI+GT+LC+ G                   AS +  F++DR++G 
Sbjct: 154 VRLEKMDMKCVYSKLKILGTLLCVFGALTMSLMHSASIIQDEKDNAS-IFVFDRDRVVGC 212

Query: 429 VCLLAGVIILSFNTILQAITLRDFPAPTSLNAITSIVGAVLTIFLQLIVEHGLEIGP-PY 605
           + LL  V ILS N +LQA TL +FPAP SL+AITS++G V+T  LQL+     ++     
Sbjct: 213 MYLLGAVFILSSNVVLQASTLAEFPAPISLSAITSLIGVVITTMLQLLQNPNTKVVTRSL 272

Query: 606 VSARKLVGYALLGGVVPGAYGSFQAWAMKKKGPVFVSTVSPIGTVFSVVISALTLKDSIT 785
           +S   LVG++LLGG+V GA  SF  WAMKK+GPV VS  SPI TV SV +S +TL + + 
Sbjct: 273 ISISNLVGFSLLGGMVSGACVSFNGWAMKKRGPVMVSMFSPIATVISVGLSVVTLGEPVR 332

Query: 786 STSLIGMFLIFGGLYSVLWAK 848
             S+ GM L+F GLY VLWAK
Sbjct: 333 IGSVGGMALMFIGLYLVLWAK 353



 Score = 67.4 bits (163), Expect(2) = 2e-54
 Identities = 32/57 (56%), Positives = 42/57 (73%)
 Frame = +1

Query: 1   PRRFSLKLLGQFLLISFAGIILFQALMLIGVKKTSPALGSVMPNLAPGFIFIIASVV 171
           P   S +L+G+ +LISFAG+ LFQ L L G++ TSPA+ + MPNLAPG IF IA +V
Sbjct: 98  PDELSPRLIGKLVLISFAGVTLFQTLFLEGIRLTSPAMATAMPNLAPGLIFFIAWMV 154


>gb|AFK40368.1| unknown [Lotus japonicus]
          Length = 352

 Score =  172 bits (435), Expect(2) = 2e-54
 Identities = 99/211 (46%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
 Frame = +3

Query: 246 WV-RFEKVDLKCFYSWVKIMGTMLCIVGXXXXXXXXXXXXXXXPLKTAS---------NM 395
           W+ R EKVDL+C YS VKI+GT+LC+VG               P+K  +          +
Sbjct: 125 WIFRMEKVDLRCTYSRVKIIGTLLCVVGAVAMSMMQSLSTSV-PIKEGTVTVQLASPPPV 183

Query: 396 ETFNQDRIIGTVCLLAGVIILSFNTILQAITLRDFPAPTSLNAITSIVGAVLTIFLQLIV 575
            TF++D+I G + LL  +IILS + +LQA TL DFPAP SL  ITS +   L    QL+ 
Sbjct: 184 LTFDRDKIFGCIYLLVAIIILSSSIVLQAFTLGDFPAPMSLCVITSFLAGSLAAVAQLVE 243

Query: 576 EHGLEIGPPYVSARKLVGYALLGGVVPGAYGSFQAWAMKKKGPVFVSTVSPIGTVFSVVI 755
           +H    G P VS   +VGY  L G V G   SF  WA++K+GPV VS  SPIGTV SVV 
Sbjct: 244 DHQFSTGWPIVSVGDMVGYGFLSGAVSGICLSFNGWALEKRGPVLVSMFSPIGTVCSVVF 303

Query: 756 SALTLKDSITSTSLIGMFLIFGGLYSVLWAK 848
           SA T+ D+I   S  GM L+F GLY VLWAK
Sbjct: 304 SAFTIGDTINIGSFAGMVLMFTGLYFVLWAK 334



 Score = 67.8 bits (164), Expect(2) = 2e-54
 Identities = 33/54 (61%), Positives = 44/54 (81%)
 Frame = +1

Query: 1   PRRFSLKLLGQFLLISFAGIILFQALMLIGVKKTSPALGSVMPNLAPGFIFIIA 162
           P++FSLKLL QF++I+ A ++ FQ+L L G+  TSPA+G+ MPNLAPG IFIIA
Sbjct: 72  PKQFSLKLLIQFIVIALASVV-FQSLFLKGINLTSPAMGTAMPNLAPGLIFIIA 124


Top