BLASTX nr result

ID: Coptis21_contig00021521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021521
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34631.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002271527.1| PREDICTED: uncharacterized protein LOC100265...    76   2e-12
ref|XP_002518965.1| conserved hypothetical protein [Ricinus comm...    74   9e-12
gb|ACF22785.1| hypothetical protein-5 [Brachypodium distachyon]        72   4e-11
ref|NP_001061008.1| Os08g0152900 [Oryza sativa Japonica Group] g...    71   8e-11

>emb|CBI34631.3| unnamed protein product [Vitis vinifera]
          Length = 1176

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 45/81 (55%), Positives = 55/81 (67%)
 Frame = -2

Query: 243  LSKDGDKIKSNAVRALGNLSRFVRFTSLPTSHSEAYFGGSSLRIYSDSHNAQTSKEVMGD 64
            L+KDGDKIKSNAVRALGNLSRF+++ S    H +   G    R  S+S+        +GD
Sbjct: 914  LTKDGDKIKSNAVRALGNLSRFLQYRSPAGIHDKPKNGH---RFVSNSNQPLP----LGD 966

Query: 63   PHWLGKMVQAFVSCVTTGNVK 1
              WL +MVQAF+SCVTTGNVK
Sbjct: 967  SSWLERMVQAFLSCVTTGNVK 987


>ref|XP_002271527.1| PREDICTED: uncharacterized protein LOC100265120 [Vitis vinifera]
          Length = 1207

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 15/96 (15%)
 Frame = -2

Query: 243  LSKDGDKIKSNAVRALGNLSRFVRFTSLPTSHSEAYFGG------SSLRIYSDSHNAQTS 82
            L+KDGDKIKSNAVRALGNLSRF+++ S    H +           +S+ + S S N +  
Sbjct: 923  LTKDGDKIKSNAVRALGNLSRFLQYRSPAGIHDKPVNCAGLSTPINSVEVLSSSTNKKNG 982

Query: 81   KEV---------MGDPHWLGKMVQAFVSCVTTGNVK 1
                        +GD  WL +MVQAF+SCVTTGNVK
Sbjct: 983  HRFVSNSNQPLPLGDSSWLERMVQAFLSCVTTGNVK 1018


>ref|XP_002518965.1| conserved hypothetical protein [Ricinus communis]
            gi|223541952|gb|EEF43498.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1169

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 46/85 (54%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
 Frame = -2

Query: 243  LSKDGDKIKSNAVRALGNLSRFVRFTSLPTSHSEAYFGGSSL--RIYSD--SHNAQTSKE 76
            L+KDGDK+KSNAVRALGNLSR +R+TS           G  +   +  D  + N QTS  
Sbjct: 907  LTKDGDKVKSNAVRALGNLSRLIRYTS-----------GKHVICNVVKDISNFNYQTSS- 954

Query: 75   VMGDPHWLGKMVQAFVSCVTTGNVK 1
              GDP  L +MVQAF+SCVTTGNVK
Sbjct: 955  --GDPRLLERMVQAFLSCVTTGNVK 977


>gb|ACF22785.1| hypothetical protein-5 [Brachypodium distachyon]
          Length = 1084

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/81 (53%), Positives = 53/81 (65%)
 Frame = -2

Query: 243 LSKDGDKIKSNAVRALGNLSRFVRFTSLPTSHSEAYFGGSSLRIYSDSHNAQTSKEVMGD 64
           L+KDG+K+KSNAVRALG LSRF+RF   P           SL+ + D HN+ +     GD
Sbjct: 783 LTKDGEKVKSNAVRALGYLSRFIRFNHQPD------VDVPSLQ-FCDFHNSDSVN--YGD 833

Query: 63  PHWLGKMVQAFVSCVTTGNVK 1
             WL +MVQA +SCVTTGNVK
Sbjct: 834 LVWLERMVQALMSCVTTGNVK 854


>ref|NP_001061008.1| Os08g0152900 [Oryza sativa Japonica Group]
           gi|37806246|dbj|BAC99763.1| unknown protein [Oryza
           sativa Japonica Group] gi|113622977|dbj|BAF22922.1|
           Os08g0152900 [Oryza sativa Japonica Group]
          Length = 511

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/81 (46%), Positives = 51/81 (62%)
 Frame = -2

Query: 243 LSKDGDKIKSNAVRALGNLSRFVRFTSLPTSHSEAYFGGSSLRIYSDSHNAQTSKEVMGD 64
           L+KDG+K+KSNAVRALG L RF+RF +                 +SD+ +  ++  + GD
Sbjct: 245 LAKDGEKVKSNAVRALGYLLRFIRFNN-----------------HSDTVDDPSNSVLCGD 287

Query: 63  PHWLGKMVQAFVSCVTTGNVK 1
           P WL +MV A +SCVTTGNVK
Sbjct: 288 PVWLERMVHALMSCVTTGNVK 308


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