BLASTX nr result

ID: Coptis21_contig00021516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021516
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32919.3| unnamed protein product [Vitis vinifera]               67   4e-09
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    67   7e-09
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    67   7e-09
ref|XP_002276216.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    65   3e-08
ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ...    64   4e-08

>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 9/229 (3%)
 Frame = -3

Query: 866 NISSPQLKYLMVKNDVHLAQFGPSQCELKIRAPNLVSLECTGYMYQDYSLKNLSSLVTAC 687
           N+S+P LK L +           S+ +L + APNL  L  T ++ +DY + NLSSLV A 
Sbjct: 170 NVSAPTLKSLAIYF---------SKYKLVVDAPNLEYLSITDFVSEDYLMSNLSSLVKAY 220

Query: 686 FDTWMYDIKNRREVLSRC-LDNILSGLTNAKTITVSVHGIQNFA------EIPSLLKPVP 528
            +          ++L R  +  +L G++N K +++S   + + +      E+P+      
Sbjct: 221 VNVGPTIRGIDDQILYRGRIYELLRGISNVKHLSLSGETLHSLSGMFCGYELPA------ 274

Query: 527 ISFLNLKCLNLKEWRNNGY-IRALTRLFGNFSGIETLILERAKEKYKPVKEADWAKQLLL 351
             F ++  L L+   + GY +  L         +E LILE   +    ++E  W   L +
Sbjct: 275 --FHSVTRLELEV--DYGYGLEFLKEFLDTSPNLEILILENVNKDECEIEE--WTLPLQV 328

Query: 350 E-CKFYKLKSVEIQNIEGCENELKFIEYLLKNAMVLEKMTITTTNAHSG 207
             C    L  VEI+  +G + EL  IE+LLKNA VL+KM+I   +   G
Sbjct: 329 PTCVELHLNEVEIKKFDGLDYELGAIEFLLKNARVLKKMSIDCRDWRDG 377


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 2/261 (0%)
 Frame = -3

Query: 902 IQNCRHHYLECINISSPQLKYLMVKNDVHLAQFGPSQCELKIRAPNLVSLECTGYMYQDY 723
           I  C    L  ++IS+P+L+ L +      +      C ++I   +L      G +  DY
Sbjct: 203 IHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHLADFTIIGTLSNDY 262

Query: 722 SLKNLSSLVTACFDTWMYDIKNRREVLSRCLDNILSGLTNAKTITVSVHGIQNFAEIPSL 543
            L   SS+V  C   +    K R+         +L G+++A+++ ++ + +    + P L
Sbjct: 263 CLYE-SSVVETCISIFSAADKPRQTAYRA--SKLLEGISSAQSLCLTTNVVDVLDDAPEL 319

Query: 542 LKPVPISFLNLKCLNLKEWRNNGYIRALTRLFGNFSGIETLILERAKEKYKPVK-EADWA 366
           L   P+ F NL  L  +   +N +      +  N   +  L          P     DW 
Sbjct: 320 LA-FPLEFRNLTSLLFESEESNLHSDGFWHIIYNSPHLIALQFYGVSMPKVPSNCREDWT 378

Query: 365 KQLLLECKFYKLKSVEIQNIEGCENELKFIEYLLKNAMVLEKMTIT-TTNAHSGNREEEL 189
                 C    LK +++    G E EL  + +LLKNA  LE M I  + +A      ++ 
Sbjct: 379 LDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMDIIYSGSARRDQGVDKT 438

Query: 188 SKFSTKLNSLPRASATASVAF 126
           ++   +L +LPR S   ++ F
Sbjct: 439 NEIHQQLLALPRWSEIGNINF 459


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 71/268 (26%), Positives = 114/268 (42%), Gaps = 22/268 (8%)
 Frame = -3

Query: 869 INISSPQLKYLMV----KNDVHLAQFGPSQCELKIRAPNLVSLECTGYMYQDYSLKNLSS 702
           +N+S+P LK L +        H  +      ++ + APNL  L  T Y+ +DY +K+L S
Sbjct: 207 VNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKDLPS 266

Query: 701 LVTACFDTWMYDIKNRREVLSRCLDN-----------ILSGLTNAKTITV------SVHG 573
           LV A       D++   E       N           +L  ++N K +++      S+ G
Sbjct: 267 LVKA-----FIDVEQDSEEFEESPHNGGISYHGPIYELLGRISNVKCLSLTGVTLDSLSG 321

Query: 572 IQNFAEIPSLLKPVPISFLNLKCLNLKEWRNNGYIRALTRLFGNFSGIETLILERAKEKY 393
                ++P+      + FL +   N   W        L     +   +E L++E      
Sbjct: 322 TIGDYKLPTFHNMTRLEFLFIGGFN---WD------FLPNFLHSSPNLEALVIETGYTN- 371

Query: 392 KPVKEADWAKQLLLE-CKFYKLKSVEIQNIEGCENELKFIEYLLKNAMVLEKMTITTTNA 216
             +    W   L +  C    LK +EI+ I G + EL+ +EYLLKNA VL++MTI   + 
Sbjct: 372 -ELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTI---DC 427

Query: 215 HSGNREEELSKFSTKLNSLPRASATASV 132
           H    ++E      KL  LPR S +  V
Sbjct: 428 HESYMDQEFC-VCKKLLGLPRGSRSCFV 454


>ref|XP_002276216.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220-like
            [Vitis vinifera]
          Length = 513

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 20/280 (7%)
 Frame = -3

Query: 905  TIQNCRHHYLECINISSPQLKYLMVKNDVHLAQFGPSQCELKIRAPNLVSLECTGYMYQD 726
            T++NC    L  + +S P+L+ L V   V   +    +  +KI AP L  +        +
Sbjct: 243  TVENC--FQLHGLTVSGPRLERLRV---VSCFESSSEKSWVKIIAPRLRVMHWEHNAITE 297

Query: 725  YS-LKNLSSLVTACFDTWMYDIKNRREVLSRCLDNILSGLTNAKTITVSVHGIQNFAEIP 549
             S L+NL+S+  A    +  D   R E   + + NILSGL++A  +T+    IQ  +   
Sbjct: 298  TSCLENLASMEEAFIGFFALDEDTRAEKY-KSVSNILSGLSHAHCLTLQSQCIQILSNNH 356

Query: 548  -SLLKPVPISFLNLKCLNLKEWRNNGYIRALTRLFGNFSGIETLILERAK----EKYKPV 384
             S +   P  F NLK + L    +   IR L  LF +   + TLIL+       EK K  
Sbjct: 357  YSTISLHP--FHNLKTMKLHTVLDKNNIRGLLCLFRSSPTLHTLILKIITHFKAEKTKAW 414

Query: 383  KEADWAKQLLLECKFY-------------KLKSVEIQNIEGCENELKFIEYLLKNAMVLE 243
             +A W      E + Y              LK V ++ +   ENE+  I++LLK+ M L+
Sbjct: 415  NKALWDHMSSSEQEQYWESRSQTFKSFLQHLKVVRMEGLVESENEIGLIKFLLKHGMALQ 474

Query: 242  KMTITTTNAHSGNREE-ELSKFSTKLNSLPRASATASVAF 126
            +M +   + HS +R+     +  +++     AS+ A +AF
Sbjct: 475  EMIL--CSGHSNSRDPVRRHEIRSQMMGFSWASSNAKLAF 512


>ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 421

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
 Frame = -3

Query: 785 LKIRAPNLVSLECTGYMYQDYSLKNLSSLVTACFDTWMY-DIKNRREVLSRC-LDNILSG 612
           L +RAPNL  L C    ++D  L+N   LV      +M  DI    E  S C     L G
Sbjct: 198 LNVRAPNLKYL-CLEGEFKDICLENTPLLVAMSIAMYMTEDIAEHFEQSSSCNFIKFLGG 256

Query: 611 LTNAKTITVSVHGIQNFAEIPSLLKPVPISFLNLKCLNLKE--WRNNGYIRALTRLFGNF 438
           +   + +   ++    +  I       PI++  LK + L +  + +   I  + RL  N 
Sbjct: 257 VPRLERLIGHIY-FTKYLSIGDYPGRHPITYSCLKVIELYQVSFEDMKEIHVVLRLITNS 315

Query: 437 SGIETLILERAKEKYKPVKEAD---WAKQLLLECKFYKLKSVEIQNIEGCENELKFIEYL 267
             ++ L +  +      V+  D   W K+    C F KL  V++ ++ G   E++FI++L
Sbjct: 316 PNLKELQISGSSNTLAAVEAPDLDFWLKECPRNCTFEKLGVVKLTDMSGVPQEMEFIKFL 375

Query: 266 LKNAMVLEKMTITTTNAHSGNREEELSKFSTKLNSLPRASATASVAFLQ 120
           L N+ VLE M+IT        R   L     +L    R+SA A + F+Q
Sbjct: 376 LANSPVLEMMSITPCVYVMDGRVNML----VELLKFRRSSAQAEILFIQ 420


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