BLASTX nr result

ID: Coptis21_contig00021507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021507
         (1331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...   442   e-122
emb|CBI30307.3| unnamed protein product [Vitis vinifera]              437   e-120
ref|XP_002308470.1| ABC transporter family, retinal flippase sub...   433   e-119
ref|XP_002530326.1| abc transporter, putative [Ricinus communis]...   429   e-117
ref|XP_003537071.1| PREDICTED: ABC transporter B family member 2...   409   e-111

>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
            vinifera]
          Length = 630

 Score =  442 bits (1137), Expect = e-122
 Identities = 231/349 (66%), Positives = 278/349 (79%)
 Frame = -3

Query: 1329 HADLSKI*KKKRMKALIPQIVQATXXXXXXXXXXXXXXXLRSFFDGSRMVSFLTSLFLLV 1150
            H DLS+  KK++MKALIPQI+Q                      DGS +VSF+TSL LL+
Sbjct: 284  HTDLSERLKKRKMKALIPQIMQIIYFGALSIFFVGSLVVPSGALDGSLLVSFVTSLVLLI 343

Query: 1149 EPIQGIGKAYNELKQGEPAIERLFDLTMFSPQVIEKLDAVELDAVKGDVKFCDISFKYSD 970
            +PIQG+GKAYNELKQGEPAIERLFDLT F  QV+EK DAV+LD+V G+VKFC+ISF+Y D
Sbjct: 344  DPIQGVGKAYNELKQGEPAIERLFDLTRFESQVLEKPDAVDLDSVIGEVKFCNISFRYGD 403

Query: 969  TSPLVLNKLNLHVKPGETIAFIGPSXXXXXXXXXXXLRLYDPLCGSILLDNCDIHKIQLK 790
              PL+LN L+LH+K GET+A +GPS           LRLYDPLCG ++LDN +I  I+LK
Sbjct: 404  RMPLILNGLDLHIKAGETVALVGPSGGGKTTLVKLLLRLYDPLCGCVILDNHNIQGIRLK 463

Query: 789  SLRRHVGLVSQDITLFSGSVAENIGYRDLMSKIDMDRVEHAARTANADEFIRKLSDGYET 610
            SLRRHVGLVSQDITL SG+V ENIGYRDLM+ IDM+RVE AA+TANADEFIR LS+GY+T
Sbjct: 464  SLRRHVGLVSQDITLLSGTVVENIGYRDLMTTIDMERVELAAQTANADEFIRNLSEGYQT 523

Query: 609  NIGPRGSILSGGQKQRLAIARAIYQNSSVLIMDEATSALDNKSEKLVRQAVERLMENHTV 430
            NIGPRGS LSGGQKQR+AIARA+YQN S+LI+DEATSALD++SE LVRQAVERLMEN TV
Sbjct: 524  NIGPRGSTLSGGQKQRIAIARALYQNCSILILDEATSALDSRSELLVRQAVERLMENRTV 583

Query: 429  LVIAHRLETILMADRIFLLENGNLEEMTQTSLLTKSGEYNSQLSSELVI 283
            LVIAHRLET+LMA R+FLL++G LEE+ +++LL   G+ +S LS+ LVI
Sbjct: 584  LVIAHRLETVLMAKRVFLLDDGKLEELNRSALL--GGKSDSLLSTGLVI 630


>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  437 bits (1123), Expect = e-120
 Identities = 224/333 (67%), Positives = 268/333 (80%)
 Frame = -3

Query: 1329 HADLSKI*KKKRMKALIPQIVQATXXXXXXXXXXXXXXXLRSFFDGSRMVSFLTSLFLLV 1150
            H DLS+  KK++MKALIPQI+Q                      DGS +VSF+TSL LL+
Sbjct: 378  HTDLSERLKKRKMKALIPQIMQIIYFGALSIFFVGSLVVPSGALDGSLLVSFVTSLVLLI 437

Query: 1149 EPIQGIGKAYNELKQGEPAIERLFDLTMFSPQVIEKLDAVELDAVKGDVKFCDISFKYSD 970
            +PIQG+GKAYNELKQGEPAIERLFDLT F  QV+EK DAV+LD+V G+VKFC+ISF+Y D
Sbjct: 438  DPIQGVGKAYNELKQGEPAIERLFDLTRFESQVLEKPDAVDLDSVIGEVKFCNISFRYGD 497

Query: 969  TSPLVLNKLNLHVKPGETIAFIGPSXXXXXXXXXXXLRLYDPLCGSILLDNCDIHKIQLK 790
              PL+LN L+LH+K GET+A +GPS           LRLYDPLCG ++LDN +I  I+LK
Sbjct: 498  RMPLILNGLDLHIKAGETVALVGPSGGGKTTLVKLLLRLYDPLCGCVILDNHNIQGIRLK 557

Query: 789  SLRRHVGLVSQDITLFSGSVAENIGYRDLMSKIDMDRVEHAARTANADEFIRKLSDGYET 610
            SLRRHVGLVSQDITL SG+V ENIGYRDLM+ IDM+RVE AA+TANADEFIR LS+GY+T
Sbjct: 558  SLRRHVGLVSQDITLLSGTVVENIGYRDLMTTIDMERVELAAQTANADEFIRNLSEGYQT 617

Query: 609  NIGPRGSILSGGQKQRLAIARAIYQNSSVLIMDEATSALDNKSEKLVRQAVERLMENHTV 430
            NIGPRGS LSGGQKQR+AIARA+YQN S+LI+DEATSALD++SE LVRQAVERLMEN TV
Sbjct: 618  NIGPRGSTLSGGQKQRIAIARALYQNCSILILDEATSALDSRSELLVRQAVERLMENRTV 677

Query: 429  LVIAHRLETILMADRIFLLENGNLEEMTQTSLL 331
            LVIAHRLET+LMA R+FLL++G LEE+ +++LL
Sbjct: 678  LVIAHRLETVLMAKRVFLLDDGKLEELNRSALL 710


>ref|XP_002308470.1| ABC transporter family, retinal flippase subfamily [Populus
            trichocarpa] gi|222854446|gb|EEE91993.1| ABC transporter
            family, retinal flippase subfamily [Populus trichocarpa]
          Length = 570

 Score =  433 bits (1113), Expect = e-119
 Identities = 229/349 (65%), Positives = 271/349 (77%)
 Frame = -3

Query: 1329 HADLSKI*KKKRMKALIPQIVQATXXXXXXXXXXXXXXXLRSFFDGSRMVSFLTSLFLLV 1150
            +ADLS +  K++MKA IPQIVQ                     FDG  MVSF+TSL  +V
Sbjct: 225  YADLSALLTKRKMKAFIPQIVQIIYFGALSILCVGSMVVSSGCFDGCSMVSFITSLIFVV 284

Query: 1149 EPIQGIGKAYNELKQGEPAIERLFDLTMFSPQVIEKLDAVELDAVKGDVKFCDISFKYSD 970
            EPIQ +GKAYNE KQGEPAIERLFDLT F  +V EK DAV+LD V GDVKFCDISF+Y +
Sbjct: 285  EPIQDVGKAYNEWKQGEPAIERLFDLTRFKSKVTEKPDAVDLDHVSGDVKFCDISFRYGE 344

Query: 969  TSPLVLNKLNLHVKPGETIAFIGPSXXXXXXXXXXXLRLYDPLCGSILLDNCDIHKIQLK 790
             SPLVLN LNLH+K GET+A +GPS           LRLYDPL G IL+DN +I  +QL+
Sbjct: 345  NSPLVLNGLNLHIKAGETVALVGPSGGGKTTLIKMLLRLYDPLHGCILVDNQNIQNVQLE 404

Query: 789  SLRRHVGLVSQDITLFSGSVAENIGYRDLMSKIDMDRVEHAARTANADEFIRKLSDGYET 610
            SLRRHVGLVSQDI+LFSG+VAENIGYRD+M+KIDM++VE AA+TANADEFIRKL  GY+T
Sbjct: 405  SLRRHVGLVSQDISLFSGTVAENIGYRDIMTKIDMEKVELAAQTANADEFIRKLPKGYQT 464

Query: 609  NIGPRGSILSGGQKQRLAIARAIYQNSSVLIMDEATSALDNKSEKLVRQAVERLMENHTV 430
            NIGPRGS LSGGQKQRLAIARA+YQ+SS+LI+DEATSALD++SE LVRQAVERLMENHTV
Sbjct: 465  NIGPRGSSLSGGQKQRLAIARALYQDSSILILDEATSALDSRSELLVRQAVERLMENHTV 524

Query: 429  LVIAHRLETILMADRIFLLENGNLEEMTQTSLLTKSGEYNSQLSSELVI 283
            LVIAHRLET+LMA R+ LL++G L+E+T + L      ++SQ  + LVI
Sbjct: 525  LVIAHRLETVLMAKRVLLLDDGKLQELTPSLL---GSHHSSQTFTGLVI 570


>ref|XP_002530326.1| abc transporter, putative [Ricinus communis]
            gi|223530130|gb|EEF32042.1| abc transporter, putative
            [Ricinus communis]
          Length = 650

 Score =  429 bits (1102), Expect = e-117
 Identities = 226/349 (64%), Positives = 272/349 (77%)
 Frame = -3

Query: 1329 HADLSKI*KKKRMKALIPQIVQATXXXXXXXXXXXXXXXLRSFFDGSRMVSFLTSLFLLV 1150
            HADL++  KKK MK LIPQI+Q                     FDG  MVSF+TSL  LV
Sbjct: 303  HADLTEHFKKKNMKVLIPQIIQIIYFGALFMLCCGSMVVSCGCFDGCSMVSFVTSLVFLV 362

Query: 1149 EPIQGIGKAYNELKQGEPAIERLFDLTMFSPQVIEKLDAVELDAVKGDVKFCDISFKYSD 970
            EPIQ +GKAYNE KQGEPAIERLFDLTM   +VIEK +AV+LD V GDVKFCD+SF+Y D
Sbjct: 363  EPIQDVGKAYNEWKQGEPAIERLFDLTMLKSKVIEKTEAVDLDHVIGDVKFCDVSFRYGD 422

Query: 969  TSPLVLNKLNLHVKPGETIAFIGPSXXXXXXXXXXXLRLYDPLCGSILLDNCDIHKIQLK 790
             S LVLN+LNLH+K GETIA IGPS           L LYDP  G IL+DN +I+ I L+
Sbjct: 423  NSSLVLNRLNLHIKAGETIALIGPSGGGKTTLVKLLLHLYDPSSGCILVDNQNINNILLE 482

Query: 789  SLRRHVGLVSQDITLFSGSVAENIGYRDLMSKIDMDRVEHAARTANADEFIRKLSDGYET 610
            SLR+HVGLVSQD TLFSG++AENIGYRDLM++IDM++VE AA+TANADEFIRKL  GY+T
Sbjct: 483  SLRKHVGLVSQDTTLFSGTIAENIGYRDLMTEIDMEKVEMAAKTANADEFIRKLPKGYKT 542

Query: 609  NIGPRGSILSGGQKQRLAIARAIYQNSSVLIMDEATSALDNKSEKLVRQAVERLMENHTV 430
            NIGPRGS LSGGQKQRLAIARA+YQ+SS+LI+DEATSALD++SE LVRQA++RLMENHTV
Sbjct: 543  NIGPRGSSLSGGQKQRLAIARALYQDSSILILDEATSALDSRSELLVRQALQRLMENHTV 602

Query: 429  LVIAHRLETILMADRIFLLENGNLEEMTQTSLLTKSGEYNSQLSSELVI 283
            ++IAHRLET+LMA R+F LENG LEE+++++L + +   NS  ++ LVI
Sbjct: 603  IIIAHRLETVLMAKRVFSLENGKLEELSRSNLFS-TAHSNSLSATGLVI 650


>ref|XP_003537071.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
            [Glycine max]
          Length = 605

 Score =  409 bits (1050), Expect = e-111
 Identities = 213/341 (62%), Positives = 261/341 (76%)
 Frame = -3

Query: 1305 KKKRMKALIPQIVQATXXXXXXXXXXXXXXXLRSFFDGSRMVSFLTSLFLLVEPIQGIGK 1126
            KKK+MKALIPQ++QA                 R   D   +VSF+TSL  L++PIQ +GK
Sbjct: 266  KKKKMKALIPQVIQAIYFGVLSILCAGSLMISRGSLDRYSLVSFVTSLLFLIQPIQDVGK 325

Query: 1125 AYNELKQGEPAIERLFDLTMFSPQVIEKLDAVELDAVKGDVKFCDISFKYSDTSPLVLNK 946
            AYNE +QGEPA ERL  +T F  +V+EK DA +LD V GD+KFCD+SF Y+D   LVLN 
Sbjct: 326  AYNEWRQGEPAAERLLAMTRFKNKVVEKPDAADLDRVTGDLKFCDVSFGYNDDMALVLNA 385

Query: 945  LNLHVKPGETIAFIGPSXXXXXXXXXXXLRLYDPLCGSILLDNCDIHKIQLKSLRRHVGL 766
            LNLH+K GE +A +GPS           LRLYDP+ G IL+DN +I  I+L SLRRHV +
Sbjct: 386  LNLHIKSGEIVAIVGPSGGGKTTLVKLLLRLYDPISGCILIDNHNIQNIRLASLRRHVSV 445

Query: 765  VSQDITLFSGSVAENIGYRDLMSKIDMDRVEHAARTANADEFIRKLSDGYETNIGPRGSI 586
            VSQDITLFSG+VAENIGYRDL +KIDMDRV+HAA+TA+ADEFI+KL +GY+TNIGPRGS 
Sbjct: 446  VSQDITLFSGTVAENIGYRDLTTKIDMDRVKHAAQTAHADEFIKKLPEGYKTNIGPRGST 505

Query: 585  LSGGQKQRLAIARAIYQNSSVLIMDEATSALDNKSEKLVRQAVERLMENHTVLVIAHRLE 406
            LSGGQ+QRLAIARA YQNSS+LI+DEATS+LD+KSE LVRQAVERLM+N TVLVI+HRLE
Sbjct: 506  LSGGQRQRLAIARAFYQNSSILILDEATSSLDSKSELLVRQAVERLMQNRTVLVISHRLE 565

Query: 405  TILMADRIFLLENGNLEEMTQTSLLTKSGEYNSQLSSELVI 283
            T++MA R+FLL+NG L+E+ Q++LL      +S LSS LVI
Sbjct: 566  TVMMAKRVFLLDNGKLKELPQSTLL-DGHHKDSLLSSGLVI 605


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