BLASTX nr result

ID: Coptis21_contig00021503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021503
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593490.1| hypothetical protein MTR_2g012750 [Medicago ...    68   2e-09
ref|XP_002317233.1| predicted protein [Populus trichocarpa] gi|2...    61   3e-07
ref|XP_002521410.1| conserved hypothetical protein [Ricinus comm...    60   4e-07
emb|CAN73264.1| hypothetical protein VITISV_021768 [Vitis vinifera]    58   2e-06

>ref|XP_003593490.1| hypothetical protein MTR_2g012750 [Medicago truncatula]
           gi|355482538|gb|AES63741.1| hypothetical protein
           MTR_2g012750 [Medicago truncatula]
          Length = 265

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 58/166 (34%), Positives = 82/166 (49%), Gaps = 7/166 (4%)
 Frame = -2

Query: 613 TDDRSHEYDEVMQQRFGQSPSKQFQRKRSDSGDFYTRGESPVKRSDQHWLNNRSDVGGKS 434
           TD R  E +    +R   SP+K  ++  S SG+   R ESP ++S    L        ++
Sbjct: 109 TDKREEEEESC--KRVNGSPAKM-RKNGSFSGE---RRESPARKSPARRLEQSP--AKRN 160

Query: 433 VYGGQITRPRNLMQNGVM------RDQGEXXXXXXXSPATRIDVGGNNRPGISRSQSGKR 272
           +   +I + R+ M NG +      RD GE       SPATR D  G+ R  + RS S ++
Sbjct: 161 IGSSRIVQRRDQMGNGGIKNQPHRRDAGEVSGRRSRSPATRTD-NGSTRSVVGRSLSARK 219

Query: 271 VVRSLGRNAVLAPEIG-QNLEGSKEKWQVKESLEDPLVSLECFIFL 137
             +S G+     PE G + +E         ESLE+PLVSLECFIFL
Sbjct: 220 TNQSPGKGRTAVPENGGRKMESKWPSTANDESLENPLVSLECFIFL 265


>ref|XP_002317233.1| predicted protein [Populus trichocarpa] gi|222860298|gb|EEE97845.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 62/186 (33%), Positives = 80/186 (43%), Gaps = 28/186 (15%)
 Frame = -2

Query: 610 DDRSHEYDEV--MQQRFGQSPSKQFQRKRSDSGDFYTR--GESPVKRSDQHWLNNRSD-- 449
           +DR   YD+   +QQR  +SP     R   + G    R  G SP +R+ +   + R+   
Sbjct: 138 NDRRDYYDDENEVQQRVSRSPLPPRNRVSGELGPRKDRVVGRSPARRTTEQSPSKRNGAM 197

Query: 448 -------VGGKSVYGGQITRPRNLMQNGVMRDQGEXXXXXXXSPATRIDVGGNNRPGISR 290
                  V G+    GQ+   R L  +   RD GE       SPAT       NR  + R
Sbjct: 198 KGGPVRLVQGRETGSGQVGIRRGLRPDPNRRDPGEGSARRSRSPAT-------NRSLMGR 250

Query: 289 SQSGKRVVRSLGRNAVLAPEIGQNLEGSKE-----KWQV----------KESLEDPLVSL 155
           S S +R  RS GR     P  G    G+K+     KW             ESLE+PLVSL
Sbjct: 251 SPSTRRTNRSPGR-VRKDPNEGGGCSGNKDNGMEAKWPSTNNSDDNGTQNESLENPLVSL 309

Query: 154 ECFIFL 137
           ECFIFL
Sbjct: 310 ECFIFL 315


>ref|XP_002521410.1| conserved hypothetical protein [Ricinus communis]
           gi|223539309|gb|EEF40900.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 317

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 57/181 (31%), Positives = 78/181 (43%), Gaps = 31/181 (17%)
 Frame = -2

Query: 586 EVMQQRFGQSPSKQFQRKRSDSGDFYTR-----GESPVKRSDQH--WLNNRSDVGGKSVY 428
           E ++QR  +SP  +F R +  SGDF  R     G+SP +R++Q     NN +  GG    
Sbjct: 144 EEVKQRVKRSPVSRFPRNQPISGDFGPRKDRVVGKSPSRRTEQSPDRRNNFTGRGGGGTG 203

Query: 427 GGQITRP----------RNLMQNGVMRDQGEXXXXXXXSPATRIDVGGNNRPGISRSQSG 278
              + +           R L  +   +D GE       SPA        NR  + R  S 
Sbjct: 204 AMSLVQSKGSINYQAGRRGLRSDSSRKDPGEGSGRRSRSPAI-------NRSTMGRCSSV 256

Query: 277 KRVVRSLGRNAVLAPEIGQN---LEGSKEKWQ-----------VKESLEDPLVSLECFIF 140
           +R + S GR  +  P  G       G++ KW              ESLE+PLVSLECFIF
Sbjct: 257 RRTIGSPGRLRIDPPASGSGDRVESGTEGKWPCTSSDVGGSTTANESLENPLVSLECFIF 316

Query: 139 L 137
           L
Sbjct: 317 L 317


>emb|CAN73264.1| hypothetical protein VITISV_021768 [Vitis vinifera]
          Length = 290

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 57/166 (34%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
 Frame = -2

Query: 610 DDRSHEYDEVMQQRFGQSPSKQFQRKRSDSGDFYTRGESPVKRSDQHWLNNRSDVGGKSV 431
           D+RS +  EV +QR  +SP++     R  SGD                      +GGK  
Sbjct: 160 DERSRDECEV-RQRVLRSPARFLSNHRPPSGD----------------------LGGKRE 196

Query: 430 YG-GQITRPRNLMQNGVMRDQGEXXXXXXXSPATRIDVGGNNRPGISRSQSGKRVVRSLG 254
           +G G+    R+    G +R            PATR D  G +R GI RS S ++  +S  
Sbjct: 197 WGVGKSPARRSEPSPGKVRS-----------PATRSD-NGASRSGIGRSPSARKTGQSPS 244

Query: 253 R-NAVLAPEIGQNLEGSKE--KWQ----VKESLEDPLVSLECFIFL 137
           R  A  AP   +N+E +++  KW       ESLE+PLVSLECFIFL
Sbjct: 245 RVPAAAAPGSSRNVEQTEKEGKWPPPPATNESLENPLVSLECFIFL 290


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