BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021470
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37820.3| unnamed protein product [Vitis vinifera]              286   2e-75
ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi...   286   2e-75
ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containi...   270   2e-70
ref|XP_002521241.1| pentatricopeptide repeat-containing protein,...   270   2e-70
ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containi...   267   1e-69

>emb|CBI37820.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  286 bits (732), Expect = 2e-75
 Identities = 132/181 (72%), Positives = 159/181 (87%)
 Frame = -2

Query: 628 RDVVSWNAIIGGYAYQGHAIEALMLYREMKRLKVRPSHITFMSVLNACAHAGLVDEGRRQ 449
           ++V+SWNA+IGGYA+ G A +AL L+  MKRLKVRP++ITF+SVLNACAHAG V EGR  
Sbjct: 319 KEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMH 378

Query: 448 FMSMVSDFGIEPHVEHFASLVDIVGRHGHLEEAMDVINSMPVAPDRAVWGALLGACRVHN 269
           F SM  +FGIEP +EHFASLVDIVGRHG LEEAMD+INSMP  PD+AVWGALLGACRVHN
Sbjct: 379 FKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRVHN 438

Query: 268 NVDLAQMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWI 89
           NV+LA++AA+ LM+LEP+SSAPYVLL+NM+ D G+WD+A E+RMMMERN IRKQPG+SW+
Sbjct: 439 NVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPGYSWV 498

Query: 88  D 86
           D
Sbjct: 499 D 499


>ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
            mitochondrial [Vitis vinifera]
          Length = 681

 Score =  286 bits (732), Expect = 2e-75
 Identities = 132/181 (72%), Positives = 159/181 (87%)
 Frame = -2

Query: 628  RDVVSWNAIIGGYAYQGHAIEALMLYREMKRLKVRPSHITFMSVLNACAHAGLVDEGRRQ 449
            ++V+SWNA+IGGYA+ G A +AL L+  MKRLKVRP++ITF+SVLNACAHAG V EGR  
Sbjct: 496  KEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMH 555

Query: 448  FMSMVSDFGIEPHVEHFASLVDIVGRHGHLEEAMDVINSMPVAPDRAVWGALLGACRVHN 269
            F SM  +FGIEP +EHFASLVDIVGRHG LEEAMD+INSMP  PD+AVWGALLGACRVHN
Sbjct: 556  FKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRVHN 615

Query: 268  NVDLAQMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWI 89
            NV+LA++AA+ LM+LEP+SSAPYVLL+NM+ D G+WD+A E+RMMMERN IRKQPG+SW+
Sbjct: 616  NVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPGYSWV 675

Query: 88   D 86
            D
Sbjct: 676  D 676


>ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
            mitochondrial-like [Glycine max]
          Length = 649

 Score =  270 bits (690), Expect = 2e-70
 Identities = 123/181 (67%), Positives = 156/181 (86%)
 Frame = -2

Query: 628  RDVVSWNAIIGGYAYQGHAIEALMLYREMKRLKVRPSHITFMSVLNACAHAGLVDEGRRQ 449
            +DV++WNA+IGGYA  G A EAL L++ MKRLK+ P++ITF+SVLNACAHAGLV+EG RQ
Sbjct: 469  KDVITWNAMIGGYASHGSAAEALELFKLMKRLKIHPTYITFISVLNACAHAGLVEEGWRQ 528

Query: 448  FMSMVSDFGIEPHVEHFASLVDIVGRHGHLEEAMDVINSMPVAPDRAVWGALLGACRVHN 269
            F SM++D+GIEP VEHFASLVDI+GR G L+EAMD+IN+MP  PD+AVWGALLGACRVHN
Sbjct: 529  FKSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLINTMPFKPDKAVWGALLGACRVHN 588

Query: 268  NVDLAQMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWI 89
            NV+LA +AA  L+RLEP+SSAPYVLLYNM+ + G+WDDA  +R++ME   ++KQ G+SW+
Sbjct: 589  NVELALVAADALIRLEPESSAPYVLLYNMYANLGQWDDAESVRVLMEEKNVKKQAGYSWV 648

Query: 88   D 86
            D
Sbjct: 649  D 649


>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 662

 Score =  270 bits (690), Expect = 2e-70
 Identities = 125/181 (69%), Positives = 157/181 (86%)
 Frame = -2

Query: 628  RDVVSWNAIIGGYAYQGHAIEALMLYREMKRLKVRPSHITFMSVLNACAHAGLVDEGRRQ 449
            ++V+SWNA+IGGYA  G+A EAL L++ M+  KV+P++ITF+SVLNACAHAGLV+EGRR 
Sbjct: 478  KEVISWNAMIGGYASHGYATEALELFKLMRSFKVQPTYITFISVLNACAHAGLVEEGRRI 537

Query: 448  FMSMVSDFGIEPHVEHFASLVDIVGRHGHLEEAMDVINSMPVAPDRAVWGALLGACRVHN 269
            F SMVSD+G+EP VEHFASLVDIVGR G LEEA+D+INSM + PD+AVWGALLGA RVHN
Sbjct: 538  FESMVSDYGVEPRVEHFASLVDIVGRQGQLEEALDLINSMTIEPDKAVWGALLGASRVHN 597

Query: 268  NVDLAQMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWI 89
            NV++A++AA+ LM+LEPDSS PY+LLYNM+VD G+WD+A EIR MMERN I+K+   SW+
Sbjct: 598  NVEMARVAAEALMKLEPDSSVPYILLYNMYVDVGQWDNAAEIRSMMERNNIKKEAAISWV 657

Query: 88   D 86
            D
Sbjct: 658  D 658


>ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
            mitochondrial-like [Cucumis sativus]
          Length = 664

 Score =  267 bits (682), Expect = 1e-69
 Identities = 122/181 (67%), Positives = 155/181 (85%)
 Frame = -2

Query: 628  RDVVSWNAIIGGYAYQGHAIEALMLYREMKRLKVRPSHITFMSVLNACAHAGLVDEGRRQ 449
            RDV+SWNA+IGGYAY G A EAL L+  MK+  V+PS+ITF+SVLNACAHAGL++EGRR+
Sbjct: 481  RDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRRE 540

Query: 448  FMSMVSDFGIEPHVEHFASLVDIVGRHGHLEEAMDVINSMPVAPDRAVWGALLGACRVHN 269
            F SMV+  GI+P VEH+A+LVDI+GRHG LEEAM +INSMP  PD+AVWGALLGAC+VHN
Sbjct: 541  FNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHN 600

Query: 268  NVDLAQMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRMMMERNGIRKQPGHSWI 89
            NV++A+ AA+ LM+L+P+SSAPYVLL+NM+ D GRWDDA E+R MME+N ++K  G+S +
Sbjct: 601  NVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRV 660

Query: 88   D 86
            D
Sbjct: 661  D 661