BLASTX nr result

ID: Coptis21_contig00021298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021298
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21908.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|NP_199228.2| uncharacterized protein [Arabidopsis thaliana] ...    64   1e-08
dbj|BAB10982.1| unnamed protein product [Arabidopsis thaliana]         64   1e-08
ref|XP_002863607.1| predicted protein [Arabidopsis lyrata subsp....    63   3e-08
gb|AAQ22611.1| At5g44150 [Arabidopsis thaliana] gi|110743420|dbj...    61   8e-08

>emb|CBI21908.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
 Frame = -3

Query: 253 TNWDRYEEEFD---DSENCFTDQKYSDVVLPKSKGADFGHLISEANSKLEYQINDGDGSS 83
           +NWDRYEEEFD   +  +  +  + +DV++PKSKGAD+G LISEA S  + + N    S 
Sbjct: 87  SNWDRYEEEFDSGSEGPSINSTNQANDVIVPKSKGADYGELISEAIS--QSRSNPYFDSF 144

Query: 82  QLFGPVVDDDFNQGMSSMFSMRG 14
                VV  DFNQG+ S+ S+RG
Sbjct: 145 ASLDDVV-PDFNQGVGSLLSVRG 166


>ref|NP_199228.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332007684|gb|AED95067.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 355

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/80 (40%), Positives = 52/80 (65%)
 Frame = -3

Query: 253 TNWDRYEEEFDDSENCFTDQKYSDVVLPKSKGADFGHLISEANSKLEYQINDGDGSSQLF 74
           +NWDRY++E D +E+  +   +SDV++PKSKGAD+ HLISEA ++   +I +        
Sbjct: 59  SNWDRYDDELDAAEDS-SISLHSDVIVPKSKGADYLHLISEAQAESNSKIENNLDCLSSL 117

Query: 73  GPVVDDDFNQGMSSMFSMRG 14
             ++ D+F++ + SM S RG
Sbjct: 118 DDLLHDEFSRVVGSMISARG 137


>dbj|BAB10982.1| unnamed protein product [Arabidopsis thaliana]
          Length = 352

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/80 (40%), Positives = 52/80 (65%)
 Frame = -3

Query: 253 TNWDRYEEEFDDSENCFTDQKYSDVVLPKSKGADFGHLISEANSKLEYQINDGDGSSQLF 74
           +NWDRY++E D +E+  +   +SDV++PKSKGAD+ HLISEA ++   +I +        
Sbjct: 59  SNWDRYDDELDAAEDS-SISLHSDVIVPKSKGADYLHLISEAQAESNSKIENNLDCLSSL 117

Query: 73  GPVVDDDFNQGMSSMFSMRG 14
             ++ D+F++ + SM S RG
Sbjct: 118 DDLLHDEFSRVVGSMISARG 137


>ref|XP_002863607.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309442|gb|EFH39866.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 371

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/79 (41%), Positives = 49/79 (62%)
 Frame = -3

Query: 253 TNWDRYEEEFDDSENCFTDQKYSDVVLPKSKGADFGHLISEANSKLEYQINDGDGSSQLF 74
           +NWDRY++E D +E+    Q  SDV+LPKSKGAD+ HLISEA +    +I +        
Sbjct: 59  SNWDRYDDELDAAEDSSISQP-SDVILPKSKGADYLHLISEAQAVSHSKIENNLDCLSSL 117

Query: 73  GPVVDDDFNQGMSSMFSMR 17
             ++ D+F++ + SM S R
Sbjct: 118 DDLLHDEFSRVVGSMISAR 136


>gb|AAQ22611.1| At5g44150 [Arabidopsis thaliana] gi|110743420|dbj|BAE99596.1|
           hypothetical protein [Arabidopsis thaliana]
          Length = 355

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/80 (38%), Positives = 51/80 (63%)
 Frame = -3

Query: 253 TNWDRYEEEFDDSENCFTDQKYSDVVLPKSKGADFGHLISEANSKLEYQINDGDGSSQLF 74
           +NWDRY++E D +E+  +   +SDV++PKSKGAD+ HLISEA ++   +I +        
Sbjct: 59  SNWDRYDDELDAAEDS-SISLHSDVIVPKSKGADYLHLISEAQAESNSKIENNLDCLSSL 117

Query: 73  GPVVDDDFNQGMSSMFSMRG 14
             ++ D+F++ + SM S  G
Sbjct: 118 DDLLHDEFSRVVGSMISAGG 137


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