BLASTX nr result

ID: Coptis21_contig00021206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021206
         (1339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39973.1| unknown [Medicago truncatula]                          277   5e-72
gb|ACJ84928.1| unknown [Medicago truncatula]                          276   7e-72
gb|AAB41101.1| transcription factor Myb1 [Nicotiana tabacum] gi|...   275   1e-71
ref|XP_002302045.1| predicted protein [Populus trichocarpa] gi|2...   275   2e-71
gb|ABR28338.1| MYB transcription factor MYB50 [Medicago truncatula]   274   3e-71

>gb|AFK39973.1| unknown [Medicago truncatula]
          Length = 258

 Score =  277 bits (708), Expect = 5e-72
 Identities = 144/279 (51%), Positives = 179/279 (64%), Gaps = 17/279 (6%)
 Frame = -2

Query: 1227 MVRAPCCEKMGLKRGPWTHEEDQVLIAFIQQHGHGNWRALPKQAGLLRCGKSCRLRWTNY 1048
            MVRAPCCEKMGLKRGPW+ EED++L ++IQ+HGHGNWRALPK AGLLRCGKSCRLRW NY
Sbjct: 1    MVRAPCCEKMGLKRGPWSLEEDEILTSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINY 60

Query: 1047 LRPDIKRGNFSNEEEETIIKLHEMLGNRWSAIAGRLPGRTDNEIKNVWHTHLKKRAKKNE 868
            LRPDIKRGNF+NEEEE IIKLHEMLGNRWSAIA +LPGRTDNEIKNVWHTHLKK  K N+
Sbjct: 61   LRPDIKRGNFTNEEEENIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKK--KLNQ 118

Query: 867  ANRETKQ---SLAEASKCETNNSSESEQMNLGAQVNENXXXXXXXXXXXXXXXSCGTDSS 697
             N E K+   S  +  + ++N+S+ ++  +  A    +                  +D S
Sbjct: 119  TNSEAKKKAISKPKIKRSDSNSSTITQSESASACTTSS------------------SDFS 160

Query: 696  SFVTADNQDMATNEDHDSSDNFFDIDEKFWAD--------------SLLFENLDFSPPTA 559
            S    + +D+ + +     +    IDE FW++              SL   N +  P   
Sbjct: 161  SVTVGERKDIKSEDIESMEETMAVIDESFWSEAAALDETSTDMKSSSLTISN-EMLPLQY 219

Query: 558  IEAELQDSFTPCNSNMDDSMDFWYDLFIKAGEQPVLPEF 442
             +  L +S    NSNMDD MDFWYD+FI+ G+Q  LPEF
Sbjct: 220  PDEILPESHEDYNSNMDDGMDFWYDIFIRTGDQIELPEF 258


>gb|ACJ84928.1| unknown [Medicago truncatula]
          Length = 258

 Score =  276 bits (707), Expect = 7e-72
 Identities = 144/279 (51%), Positives = 179/279 (64%), Gaps = 17/279 (6%)
 Frame = -2

Query: 1227 MVRAPCCEKMGLKRGPWTHEEDQVLIAFIQQHGHGNWRALPKQAGLLRCGKSCRLRWTNY 1048
            MVRAPCCEKMGLKRGPW+ EED++L ++IQ+HGHGNWRALPK AGLLRCGKSCRLRW NY
Sbjct: 1    MVRAPCCEKMGLKRGPWSLEEDEILTSYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINY 60

Query: 1047 LRPDIKRGNFSNEEEETIIKLHEMLGNRWSAIAGRLPGRTDNEIKNVWHTHLKKRAKKNE 868
            LRPDIKRGNF+NEEEE IIKLHEMLGNRWSAIA +LPGRTDNEIKNVWHTHLKK  K N+
Sbjct: 61   LRPDIKRGNFTNEEEENIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKK--KLNQ 118

Query: 867  ANRETKQ---SLAEASKCETNNSSESEQMNLGAQVNENXXXXXXXXXXXXXXXSCGTDSS 697
             N E K+   S  +  + ++N+S+ ++  +  A    +                  +D S
Sbjct: 119  TNSEAKKKAISKPKIKRSDSNSSTITQSESASACTTSS------------------SDFS 160

Query: 696  SFVTADNQDMATNEDHDSSDNFFDIDEKFWAD--------------SLLFENLDFSPPTA 559
            S    + +D+ + +     +    IDE FW++              SL   N +  P   
Sbjct: 161  SVTVGERKDIKSEDIESMEETMAVIDESFWSEAAALDETSTDMKSSSLTISN-EMLPLQY 219

Query: 558  IEAELQDSFTPCNSNMDDSMDFWYDLFIKAGEQPVLPEF 442
             +  L +S    NSNMDD MDFWYD+FI+ G+Q  LPEF
Sbjct: 220  PDEILPESHGDYNSNMDDGMDFWYDIFIRTGDQIELPEF 258


>gb|AAB41101.1| transcription factor Myb1 [Nicotiana tabacum]
            gi|6552363|dbj|BAA88223.1| myb-related transcription
            factor LBM3 [Nicotiana tabacum]
          Length = 278

 Score =  275 bits (704), Expect = 1e-71
 Identities = 149/281 (53%), Positives = 178/281 (63%), Gaps = 19/281 (6%)
 Frame = -2

Query: 1227 MVRAPCCEKMGLKRGPWTHEEDQVLIAFIQQHGHGNWRALPKQAGLLRCGKSCRLRWTNY 1048
            MVRAPCCEKMGLK+GPW  EEDQ+LI+FIQ +GHGNWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1    MVRAPCCEKMGLKKGPWIPEEDQILISFIQTNGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 1047 LRPDIKRGNFSNEEEETIIKLHEMLGNRWSAIAGRLPGRTDNEIKNVWHTHLKKRAK--- 877
            LRPDIKRGNF+ EEEETII+LHEMLGNRWSAIA +LPGRTDNEIKNVWHTHLKK+ K   
Sbjct: 61   LRPDIKRGNFTKEEEETIIQLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLKDYK 120

Query: 876  -KNEANRETKQSLAEASKCETNNSSESEQMNLGAQVNENXXXXXXXXXXXXXXXSCGTDS 700
                + R +K    ++    T+ SS +  + +   +N                 S  T+ 
Sbjct: 121  PPQNSKRHSKSKNHDSKGPTTSESSNNSDLTI---INTQKHIDSPVLAPNSPQISSSTEM 177

Query: 699  SSFVTADNQDMAT--NEDHDSSDNFFDIDEKFWADSLLFENLDFSPP---TAIEAELQ-- 541
            S+    D+  M     E  +SS+ F +IDE FW D L  +N   S      A   ELQ  
Sbjct: 178  STVTLVDDHQMVVIKQEVMESSEYFPEIDESFWTDELTTDNNWSSTDHVMVAANQELQVQ 237

Query: 540  ---DSFTPCN-----SNMDDSMDFWYDLFIKAGEQPVLPEF 442
                SF   N     + M+D MDFWY++FIK  + P LPEF
Sbjct: 238  LPFSSFKEENVDILATKMEDDMDFWYNVFIKTDDLPELPEF 278


>ref|XP_002302045.1| predicted protein [Populus trichocarpa] gi|222843771|gb|EEE81318.1|
            predicted protein [Populus trichocarpa]
          Length = 272

 Score =  275 bits (703), Expect = 2e-71
 Identities = 151/276 (54%), Positives = 177/276 (64%), Gaps = 15/276 (5%)
 Frame = -2

Query: 1227 MVRAPCCEKMGLKRGPWTHEEDQVLIAFIQQHGHGNWRALPKQAGLLRCGKSCRLRWTNY 1048
            MVRAPCCEKMGLKRGPWT EED++LI  IQ +GHGNWRALPKQAGLLRCGKSCRLRW NY
Sbjct: 1    MVRAPCCEKMGLKRGPWTAEEDRILINHIQLYGHGNWRALPKQAGLLRCGKSCRLRWINY 60

Query: 1047 LRPDIKRGNFSNEEEETIIKLHEMLGNRWSAIAGRLPGRTDNEIKNVWHTHLKKRAKKNE 868
            LRPDIKRGNFS EEE+TIIKLHEMLGNRWSAIA RLPGRTDNEIKNVWHTHLKKR ++N 
Sbjct: 61   LRPDIKRGNFSREEEDTIIKLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLEQNH 120

Query: 867  ANRETKQSLAEASKCETNNSSESEQMNLGAQVNENXXXXXXXXXXXXXXXSCGTDSSSFV 688
               E      + S+      +  E ++    V                   C +D SS  
Sbjct: 121  FAPEINGRSVDVSRFNHELKTGPEIVSSSNVVAAG--CDQSKEHRPISPQQCSSDVSSVT 178

Query: 687  TAD-NQDMATNEDHDSSDNFFDIDEKFWADSLLFEN----LDFSPPTAIEAELQDSFTP- 526
            T D + DM T      SD+F ++DE FW++ L  +N     D+S   + E +LQ  F+P 
Sbjct: 179  TVDTSNDMCTKV--AESDDFLEMDEIFWSEVLSADNSSMMSDYS-AISTEPQLQFPFSPL 235

Query: 525  ---------CNSNMDDSMDFWYDLFIKAGEQPVLPE 445
                      NSNM D MDFW++LF +AGE P L E
Sbjct: 236  IIDVEQVQATNSNMYDGMDFWHNLFTRAGELPELTE 271


>gb|ABR28338.1| MYB transcription factor MYB50 [Medicago truncatula]
          Length = 258

 Score =  274 bits (701), Expect = 3e-71
 Identities = 143/279 (51%), Positives = 178/279 (63%), Gaps = 17/279 (6%)
 Frame = -2

Query: 1227 MVRAPCCEKMGLKRGPWTHEEDQVLIAFIQQHGHGNWRALPKQAGLLRCGKSCRLRWTNY 1048
            MVRAPCCEKMGLKRGPW+ EED++L ++IQ+H HGNWRALPK AGLLRCGKSCRLRW NY
Sbjct: 1    MVRAPCCEKMGLKRGPWSLEEDEILTSYIQKHDHGNWRALPKLAGLLRCGKSCRLRWINY 60

Query: 1047 LRPDIKRGNFSNEEEETIIKLHEMLGNRWSAIAGRLPGRTDNEIKNVWHTHLKKRAKKNE 868
            LRPDIKRGNF+NEEEE IIKLHEMLGNRWSAIA +LPGRTDNEIKNVWHTHLKK  K N+
Sbjct: 61   LRPDIKRGNFTNEEEENIIKLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKK--KLNQ 118

Query: 867  ANRETKQ---SLAEASKCETNNSSESEQMNLGAQVNENXXXXXXXXXXXXXXXSCGTDSS 697
             N E K+   S  +  + ++N+S+ ++  +  A    +                  +D S
Sbjct: 119  TNSEAKKKAISKPKIKRSDSNSSTITQSESASACTTSS------------------SDFS 160

Query: 696  SFVTADNQDMATNEDHDSSDNFFDIDEKFWAD--------------SLLFENLDFSPPTA 559
            S    + +D+ + +     +    IDE FW++              SL   N +  P   
Sbjct: 161  SVTVGERKDIKSEDIESMEETMAVIDESFWSEAAALDETSTDMKSSSLTISN-EMLPLQY 219

Query: 558  IEAELQDSFTPCNSNMDDSMDFWYDLFIKAGEQPVLPEF 442
             +  L +S    NSNMDD MDFWYD+FI+ G+Q  LPEF
Sbjct: 220  PDEILPESHEDYNSNMDDGMDFWYDIFIRTGDQIELPEF 258


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