BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020980
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524459.1| conserved hypothetical protein [Ricinus comm...   190   3e-46
ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containin...   186   5e-45
ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containin...   186   6e-45
ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containin...   162   8e-38

>ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis]
           gi|223536247|gb|EEF37899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 341

 Score =  190 bits (482), Expect = 3e-46
 Identities = 99/237 (41%), Positives = 135/237 (56%), Gaps = 25/237 (10%)
 Frame = +2

Query: 146 PHFFQPTPFASSGDDSVGFWPEIPINNN-------DRPVPPFKRPRNSEATPL-----VP 289
           P F  P P   SG D++G WP+ P+N+N       D   PPFKRPRNSE         +P
Sbjct: 8   PPFMSPQPTYQSGSDAIGIWPQFPMNSNEQFDPQFDHHQPPFKRPRNSEDNNQSMNYRMP 67

Query: 290 VPSHXXXXXXXXXXXXXXXXXXXKLFFKTRLCEKFRQGTCPYGSSCHYAHGIEEMRKAPP 469
            P++                    +FFKTR+C KF+ G+C  G +C++AHG+++MR+ PP
Sbjct: 68  PPNNLPINKGTT-----------NIFFKTRMCAKFKTGSCRNGENCNFAHGMQDMRQPPP 116

Query: 470 NWQD---IVASNGDDRMM-NWEEDQNIINRMRLCRKFYNGEECPFGDRCNYRHEDPRK-- 631
           NWQ+   +V    +DR   NW++DQ II++M+LC+KFYNGE+CP+GDRCN+ HEDP K  
Sbjct: 117 NWQELVGVVVRGEEDRPAGNWDDDQRIIHKMKLCKKFYNGEQCPYGDRCNFLHEDPSKFR 176

Query: 632 -----FRETSVISIRTTGPPI--DDGPKTEQSDRSETVNSSVDGNWMNLKPASWKTK 781
                FRE+S ISI TT PP+    G  +         N+  D    N+KP  WKTK
Sbjct: 177 DDAGRFRESSAISIGTTAPPMMHGSGGLSVVEVNKPVNNAGADAYRGNMKPVYWKTK 233


>ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Cucumis sativus] gi|449520655|ref|XP_004167349.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           39-like [Cucumis sativus]
          Length = 347

 Score =  186 bits (472), Expect = 5e-45
 Identities = 102/240 (42%), Positives = 136/240 (56%), Gaps = 20/240 (8%)
 Frame = +2

Query: 122 DMTTPVLPPHFFQPTPFASSGDDSVGFWPEIPINNNDRPV-------PPFKRPRNSEATP 280
           DM   V+PP       + S+GD S G W + P N+   P        PP+KR RNSE  P
Sbjct: 5   DMRASVIPPPLHS---YGSNGDAS-GCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENP 60

Query: 281 LVPVP-SHXXXXXXXXXXXXXXXXXXXKLFFKTRLCEKFRQGTCPYGSSCHYAHGIEEMR 457
             P+  S+                    +FFKTR+C KF+ G C  G+SC++AHG+E+MR
Sbjct: 61  SSPISYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMR 120

Query: 458 KAPPNWQDIVASNGDDRMMN-WEEDQNIINRMRLCRKFYNGEECPFGDRCNYRHEDPRK- 631
           + PPNWQ+IV    DD+ +N W +DQ II +M+LCRKFYNGEECP+GDRCN+ HEDP K 
Sbjct: 121 QPPPNWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKF 180

Query: 632 ------FRETSVISIRTTGPPIDDGPKTEQSDRSETVNSSVDGNWM----NLKPASWKTK 781
                 FRE+S ISI TTG P+ +G  +        V S    + +    N++P+ WKTK
Sbjct: 181 RDDSGRFRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTK 240


>ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Vitis vinifera]
          Length = 349

 Score =  186 bits (471), Expect = 6e-45
 Identities = 101/240 (42%), Positives = 133/240 (55%), Gaps = 20/240 (8%)
 Frame = +2

Query: 122 DMTTPVLPPHFFQPTPFASSGDDSVGFWPEIPINNNDRPV------PPFKRPRNSEATPL 283
           D    V PP    P P    GDD +G W + P+NN +  V      PP KR RNSE    
Sbjct: 5   DSRALVAPP--LHPFPV---GDDDIGSWSQFPMNNEEYEVHSHFEYPPHKRTRNSEGQMP 59

Query: 284 VPVPSHXXXXXXXXXXXXXXXXXXXKLFFKTRLCEKFRQGTCPYGSSCHYAHGIEEMRKA 463
              P H                    +FFKTR+C KF+ G C  G +C++AHG+E+MR+ 
Sbjct: 60  NSSP-HPSMNPRIHPPNAPTSRGTSNIFFKTRICAKFKLGQCRNGENCNFAHGMEDMRQP 118

Query: 464 PPNWQDIVASNGDDRMMN---WEEDQNIINRMRLCRKFYNGEECPFGDRCNYRHEDPRKF 634
           PPNWQ++V   G +       W+EDQ II++M+LC+KFYNGEECP+GDRCN+ HEDP+KF
Sbjct: 119 PPNWQELVNVGGREEERGTKIWDEDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPKKF 178

Query: 635 RETS-------VISIRTTGPPIDDGP----KTEQSDRSETVNSSVDGNWMNLKPASWKTK 781
           R+ S        ISI TTGPP++ G      +  S    ++NS +D    N+KP  WKTK
Sbjct: 179 RDDSARPRESFAISIGTTGPPMEHGSGSNLGSNLSSNLSSMNSGLDPFRGNVKPTYWKTK 238


>ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|222850140|gb|EEE87687.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  181 bits (458), Expect = 2e-43
 Identities = 98/237 (41%), Positives = 139/237 (58%), Gaps = 18/237 (7%)
 Frame = +2

Query: 125 MTTPVLPPHFFQPTPFASSGDDSVGFWPEIPINNNDR---PVPPFKRPRNSEATPLVPVP 295
           M+ P     F  P     +G D++G WP+  +NN ++     PP+KRPRNSE  P   V 
Sbjct: 1   MSYPDSHDSFMSPQASYQAGSDAIGVWPQFVMNNIEQFEHHQPPYKRPRNSEDNPNQSVN 60

Query: 296 SHXXXXXXXXXXXXXXXXXXXKLFFKTRLCEKFRQGTCPYGSSCHYAHGIEEMRKAPPNW 475
           S                     +FFKTR+C KF+ GTC  G +C++AHG++++R+ PPNW
Sbjct: 61  SRTPPTNNLPVHKGAT-----NIFFKTRVCAKFKTGTCRNGENCNFAHGMQDLRQPPPNW 115

Query: 476 QDIVA---SNGDDRMM--NWEEDQNIINRMRLCRKFYNGEECPFGDRCNYRHEDPRK--- 631
           +++V    S+ +DR    NWE+DQ II++M+LC+KFYNGEECP+GDRCN+ HEDP K   
Sbjct: 116 KELVGVSVSSEEDRSTATNWEDDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPSKFRE 175

Query: 632 ----FRETSVISIRTTGPPIDDGPKT-EQSDRSETVNSSV-DGNWMN-LKPASWKTK 781
               FRE+S ISI TTG  +  G      ++ +   N++V D +  N +KP  WKTK
Sbjct: 176 DTGRFRESSAISIGTTGQALGHGSGVFNAAEVNRPANNAVSDASRSNIIKPVYWKTK 232


>ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Glycine max]
          Length = 347

 Score =  162 bits (410), Expect = 8e-38
 Identities = 86/230 (37%), Positives = 127/230 (55%), Gaps = 18/230 (7%)
 Frame = +2

Query: 146 PHFFQPTPFASSGDDSVGFWPEIPINNN--------DRPVPPFKRPRNSEATPLVPVPSH 301
           P F    P  S+  D++    + P+NN         DRP P FKR R  + +      S+
Sbjct: 8   PSFMMSPPSFSTDTDAIEVRLQFPMNNESLEPHSPQDRP-PSFKRARTCDNSL-----SN 61

Query: 302 XXXXXXXXXXXXXXXXXXXKLFFKTRLCEKFRQGTCPYGSSCHYAHGIEEMRKAPPNWQD 481
                               +FFKTR+C KFR G C  G +C++AHG+E+MR+ PPNWQ+
Sbjct: 62  AMACPPRMIQHPAVNKGTSHIFFKTRICAKFRVGACRNGENCNFAHGLEDMRQPPPNWQE 121

Query: 482 IVASNGDDRMM---NWEEDQNIINRMRLCRKFYNGEECPFGDRCNYRHEDPRKFRETSV- 649
           +V   G++R     +W++DQ II++M+LC+K+YNGEECP+GD+C++ HEDP +FR+ SV 
Sbjct: 122 LVGLRGEERPPMAGDWDDDQKIIHKMKLCKKYYNGEECPYGDKCSFLHEDPARFRDDSVR 181

Query: 650 ------ISIRTTGPPIDDGPKTEQSDRSETVNSSVDGNWMNLKPASWKTK 781
                 ISI T G P   G  +   + +  VN+ ++    N+K   WKTK
Sbjct: 182 YRESTSISIGTNGSPKSYGDASNNLESNRAVNTGLNVFRGNVKSTYWKTK 231