BLASTX nr result

ID: Coptis21_contig00020933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020933
         (1415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515259.1| pectinesterase, putative [Ricinus communis] ...    96   2e-17
ref|XP_002871852.1| predicted protein [Arabidopsis lyrata subsp....    96   3e-17
ref|XP_003606081.1| Pectinesterase [Medicago truncatula] gi|3555...    94   7e-17
ref|XP_002883483.1| predicted protein [Arabidopsis lyrata subsp....    92   3e-16
ref|NP_189055.1| putative pectinesterase 29 [Arabidopsis thalian...    92   3e-16

>ref|XP_002515259.1| pectinesterase, putative [Ricinus communis]
            gi|223545739|gb|EEF47243.1| pectinesterase, putative
            [Ricinus communis]
          Length = 663

 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 43/69 (62%), Positives = 51/69 (73%)
 Frame = -1

Query: 1034 LPGFITAQKRSTTYEPTGFVFKFCTVIGTGKAYLGRAWGPFSRVLFYNSQLSEVVTPEGW 855
            L G ITAQK+      +GFVFK C V GTGKA+LGRAWGP+S V+FYNS LS+V+  EGW
Sbjct: 220  LQGCITAQKKEWPQHSSGFVFKNCVVSGTGKAFLGRAWGPYSTVIFYNSTLSDVIVSEGW 279

Query: 854  NAWGYKGYE 828
            NAW Y  +E
Sbjct: 280  NAWNYVHHE 288



 Score = 91.3 bits (225), Expect = 6e-16
 Identities = 42/71 (59%), Positives = 52/71 (73%), Gaps = 3/71 (4%)
 Frame = -1

Query: 1043 GRFLP---GFITAQKRSTTYEPTGFVFKFCTVIGTGKAYLGRAWGPFSRVLFYNSQLSEV 873
            GR+ P   G+ITAQK+  T   +GFVFK   + GTGKAYLGRAWGP+S V+  N+ LS+V
Sbjct: 535  GRYEPELEGYITAQKKELTDHESGFVFKDSEINGTGKAYLGRAWGPYSTVIIQNTTLSDV 594

Query: 872  VTPEGWNAWGY 840
            V P+GWNAW Y
Sbjct: 595  VVPQGWNAWDY 605


>ref|XP_002871852.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317689|gb|EFH48111.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score = 95.5 bits (236), Expect = 3e-17
 Identities = 44/75 (58%), Positives = 51/75 (68%)
 Frame = -1

Query: 1028 GFITAQKRSTTYEPTGFVFKFCTVIGTGKAYLGRAWGPFSRVLFYNSQLSEVVTPEGWNA 849
            G+ITAQ R+  Y+  GFVF  C V GTGKAYLGRAW P+SRV+FYNS L++VV P GW  
Sbjct: 216  GYITAQGRNNPYDANGFVFINCLVYGTGKAYLGRAWRPYSRVIFYNSNLTDVVVPRGWWE 275

Query: 848  WGYKGYE*VLYGLNH 804
            W   GYE  L    H
Sbjct: 276  WNQTGYEKQLIFAEH 290


>ref|XP_003606081.1| Pectinesterase [Medicago truncatula] gi|355507136|gb|AES88278.1|
            Pectinesterase [Medicago truncatula]
          Length = 323

 Score = 94.4 bits (233), Expect = 7e-17
 Identities = 42/67 (62%), Positives = 52/67 (77%)
 Frame = -1

Query: 1028 GFITAQKRSTTYEPTGFVFKFCTVIGTGKAYLGRAWGPFSRVLFYNSQLSEVVTPEGWNA 849
            GFITAQ+R ++ E TGF+FK   V G GK +LGRAWGP+SRVLF+ + LS VV P+GWNA
Sbjct: 203  GFITAQRRYSSTESTGFIFKGGRVEGIGKVHLGRAWGPYSRVLFWGTHLSAVVLPQGWNA 262

Query: 848  WGYKGYE 828
            W Y+G E
Sbjct: 263  WNYQGQE 269


>ref|XP_002883483.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329323|gb|EFH59742.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 335

 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 41/77 (53%), Positives = 53/77 (68%)
 Frame = -1

Query: 1034 LPGFITAQKRSTTYEPTGFVFKFCTVIGTGKAYLGRAWGPFSRVLFYNSQLSEVVTPEGW 855
            L G+ITAQ R+  Y+  GF+F  C V GTG A+LGR W  +SRV+FYNS L++VV PEGW
Sbjct: 213  LAGYITAQGRTNPYDANGFIFINCLVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGW 272

Query: 854  NAWGYKGYE*VLYGLNH 804
            +AW + G+E  L    H
Sbjct: 273  DAWNFVGHENQLIFAEH 289


>ref|NP_189055.1| putative pectinesterase 29 [Arabidopsis thaliana]
            gi|75339286|sp|Q4PSN0.1|PME29_ARATH RecName:
            Full=Probable pectinesterase 29; Short=PE 29; AltName:
            Full=Pectin methylesterase 29; Short=AtPME29; Flags:
            Precursor gi|67633660|gb|AAY78754.1| pectinesterase
            family protein [Arabidopsis thaliana]
            gi|332643340|gb|AEE76861.1| putative pectinesterase 29
            [Arabidopsis thaliana]
          Length = 335

 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 41/77 (53%), Positives = 53/77 (68%)
 Frame = -1

Query: 1034 LPGFITAQKRSTTYEPTGFVFKFCTVIGTGKAYLGRAWGPFSRVLFYNSQLSEVVTPEGW 855
            L G+ITAQ R+  Y+  GF+F  C V GTG A+LGR W  +SRV+FYNS L++VV PEGW
Sbjct: 213  LAGYITAQGRTNPYDANGFIFINCLVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGW 272

Query: 854  NAWGYKGYE*VLYGLNH 804
            +AW + G+E  L    H
Sbjct: 273  DAWNFVGHENQLVFAEH 289


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