BLASTX nr result

ID: Coptis21_contig00020827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020827
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38353.3| unnamed protein product [Vitis vinifera]              184   1e-44
ref|XP_003635088.1| PREDICTED: uncharacterized protein LOC100853...   182   4e-44
emb|CAN83308.1| hypothetical protein VITISV_023019 [Vitis vinifera]   165   7e-39
ref|XP_002310772.1| predicted protein [Populus trichocarpa] gi|2...   160   2e-37
ref|XP_002281100.1| PREDICTED: uncharacterized protein LOC100255...   159   3e-37

>emb|CBI38353.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  184 bits (466), Expect = 1e-44
 Identities = 101/206 (49%), Positives = 130/206 (63%), Gaps = 5/206 (2%)
 Frame = -1

Query: 607 KGTHRQVNKDDYTPKKDYSVINSSQPMVTQNSCANPQKQNNAAVVKEVLLDSGIHRSHSA 428
           +G   +  + D T K++ S    S       S ANP+K++N  + +E +LDS +HR HS+
Sbjct: 184 RGGALEACRPDITSKRENSAAYHSC-----QSHANPRKESNG-ISEEKILDSSVHRCHSS 237

Query: 427 LSYRSTYKTRTSPPVENLAKDLWSCHSQPLSYQEYVPSATSGVVSLAEHLGT-----LPE 263
           LS RS + TRTSPP E+L K + +CHSQPLS  EY  + +S V+SLAEHLGT     +PE
Sbjct: 238 LSQRSAFPTRTSPPAESLTKAIRACHSQPLSMMEYAQNTSSNVISLAEHLGTRISDHVPE 297

Query: 262 VPNRISEDLIKCISAIYCRVCDXXXXXXXXXXXXXXXXXXXXXXXPQDHYNSWSPCRRKD 83
            PNRISED+IKC+SAI+C++ D                       PQDH + WSP  RKD
Sbjct: 298 TPNRISEDMIKCMSAIFCKLAD-PPLTHHGLSSPNSSLSSISAFSPQDHCDMWSPGFRKD 356

Query: 82  SSFDAYLENPFHIEGLKEFSGPYSTM 5
           SSFD  L+NPFH+EGLKEFSGPYSTM
Sbjct: 357 SSFDVRLDNPFHVEGLKEFSGPYSTM 382


>ref|XP_003635088.1| PREDICTED: uncharacterized protein LOC100853414 [Vitis vinifera]
          Length = 595

 Score =  182 bits (462), Expect = 4e-44
 Identities = 100/206 (48%), Positives = 129/206 (62%), Gaps = 5/206 (2%)
 Frame = -1

Query: 607 KGTHRQVNKDDYTPKKDYSVINSSQPMVTQNSCANPQKQNNAAVVKEVLLDSGIHRSHSA 428
           +G   +  + D T K++ S    S       S  NP+K++N  + +E +LDS +HR HS+
Sbjct: 148 RGGALEACRPDITSKRENSAAYHSC-----QSHVNPRKESNG-ISEEKILDSSVHRCHSS 201

Query: 427 LSYRSTYKTRTSPPVENLAKDLWSCHSQPLSYQEYVPSATSGVVSLAEHLGT-----LPE 263
           LS RS + TRTSPP E+L K + +CHSQPLS  EY  + +S V+SLAEHLGT     +PE
Sbjct: 202 LSQRSAFPTRTSPPAESLTKAIRACHSQPLSMMEYAQNTSSNVISLAEHLGTRISDHVPE 261

Query: 262 VPNRISEDLIKCISAIYCRVCDXXXXXXXXXXXXXXXXXXXXXXXPQDHYNSWSPCRRKD 83
            PNRISED+IKC+SAI+C++ D                       PQDH + WSP  RKD
Sbjct: 262 TPNRISEDMIKCMSAIFCKLAD-PPLTHHGLSSPNSSLSSISAFSPQDHCDMWSPGFRKD 320

Query: 82  SSFDAYLENPFHIEGLKEFSGPYSTM 5
           SSFD  L+NPFH+EGLKEFSGPYSTM
Sbjct: 321 SSFDVRLDNPFHVEGLKEFSGPYSTM 346


>emb|CAN83308.1| hypothetical protein VITISV_023019 [Vitis vinifera]
          Length = 719

 Score =  165 bits (417), Expect = 7e-39
 Identities = 99/240 (41%), Positives = 128/240 (53%), Gaps = 39/240 (16%)
 Frame = -1

Query: 607 KGTHRQVNKDDYTPKKDYSVINSSQPMVTQNSCANPQKQNNAAVVKEVLLDSGIHRSHSA 428
           +G   +  + D T K++ S    S       S  NP+K++N  + +E +LDS +HR HS+
Sbjct: 238 RGGALEACRPDITSKRENSAAYHSC-----QSHVNPRKESNG-ISEEKILDSSVHRCHSS 291

Query: 427 LSYRSTYKTRTSPPVENLAKDLWSCHSQPLSYQE-------------------------- 326
           LS RS + TRTSPP E+L K + +CHSQPLS  E                          
Sbjct: 292 LSQRSAFPTRTSPPAESLTKAIRACHSQPLSMMEPTSCYNDHRKNAGDGKLYFGCMVILY 351

Query: 325 --------YVPSATSGVVSLAEHLGT-----LPEVPNRISEDLIKCISAIYCRVCDXXXX 185
                   Y  + +S V+SLAEHLGT     +PE PNRISED+IKC+SAI+C++ D    
Sbjct: 352 CNPVTSVQYAQNTSSNVISLAEHLGTRISDHVPETPNRISEDMIKCMSAIFCKLADPPLT 411

Query: 184 XXXXXXXXXXXXXXXXXXXPQDHYNSWSPCRRKDSSFDAYLENPFHIEGLKEFSGPYSTM 5
                               QDH + WSP  RKDSSFD  L+NPFH+EGLKEFSGPYSTM
Sbjct: 412 HHGLSSPNSSLSSISAFSP-QDHCDMWSPGFRKDSSFDVRLDNPFHVEGLKEFSGPYSTM 470


>ref|XP_002310772.1| predicted protein [Populus trichocarpa] gi|222853675|gb|EEE91222.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  160 bits (405), Expect = 2e-37
 Identities = 90/188 (47%), Positives = 115/188 (61%), Gaps = 8/188 (4%)
 Frame = -1

Query: 544 NSSQPMVTQNSCA---NPQKQNNAAVVKEVLLDSGIHRSHSALSYRSTYKTRTSPPVENL 374
           +  +   TQ +C    N  K+ N    +E LLDSG+HR HS+LS RS +  RTSPP E L
Sbjct: 133 SKKETSATQTACQSRDNKWKETNVIGGEEKLLDSGVHRCHSSLSQRSAFSNRTSPPEEFL 192

Query: 373 AKDLWSCHSQPLSYQEYVPSATSGVVSLAEHLGT-----LPEVPNRISEDLIKCISAIYC 209
            + + +CHSQPLS  EY  SA S V+SLAEHLGT     +PE PN++SED+IKC+SAIYC
Sbjct: 193 GRAVRACHSQPLSMMEYAQSA-SNVISLAEHLGTSIYDHVPETPNKLSEDMIKCMSAIYC 251

Query: 208 RVCDXXXXXXXXXXXXXXXXXXXXXXXPQDHYNSWSPCRRKDSSFDAYLENPFHIEGLKE 29
           ++ D                       P++  + WSP  R +SSFD  L+NPF +EGLKE
Sbjct: 252 KLSD-PPLTHNGLSSPNSSLSSMSAFSPREQCDMWSPGFRNNSSFDVRLDNPFLVEGLKE 310

Query: 28  FSGPYSTM 5
           FSGPYSTM
Sbjct: 311 FSGPYSTM 318


>ref|XP_002281100.1| PREDICTED: uncharacterized protein LOC100255635 [Vitis vinifera]
          Length = 625

 Score =  159 bits (403), Expect = 3e-37
 Identities = 94/202 (46%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
 Frame = -1

Query: 595 RQVNKDDYTPKKDYSVINSSQPMVTQNSCANPQKQNNAAVVKEVLLDSGIHRSHSALSYR 416
           ++V+ D    K + SVI+SS  +  ++S  NP K+ N       LLDS IHRSHS+LS R
Sbjct: 175 QEVSGDKIISKTENSVIHSSHLLSPRDSIDNPPKECNDIWGPHKLLDSSIHRSHSSLSQR 234

Query: 415 STYKTRTSPPVENLAKDLWSCHSQPLSYQEYVPSATSGVVSLAEHLGTL-----PEVPNR 251
           ST   RTSP ++ LAK + S HS PLS  E   +A S  +SLAEHLGT      P  PNR
Sbjct: 235 STCPIRTSPSMQTLAKAVDSYHSLPLSMLERADNAPSNAISLAEHLGTNICDHDPMTPNR 294

Query: 250 ISEDLIKCISAIYCRVCDXXXXXXXXXXXXXXXXXXXXXXXPQDHYNSWSPCRRKDSSFD 71
           +SE++IKCISAIYCR+ D                       P+   + WSP  RK+SSF+
Sbjct: 295 LSEEMIKCISAIYCRLADPPLSNNDYPSSPISSPLSMNEFSPRGQCDMWSPQCRKNSSFN 354

Query: 70  AYLENPFHIEGLKEFSGPYSTM 5
           + L+NPFHIE  KEFSGPY TM
Sbjct: 355 SVLDNPFHIEESKEFSGPYCTM 376


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