BLASTX nr result

ID: Coptis21_contig00020812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020812
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP37984.1| carotenoid cleavage dioxygenase 8 [Actinidia chin...    81   8e-14
gb|AEH96363.1| carotenoid cleavage dioxygenase 8 [Solanum lycope...    71   8e-11
ref|XP_002281239.1| PREDICTED: carotenoid cleavage dioxygenase 8...    68   9e-10
ref|XP_002324797.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
emb|CBI20852.3| unnamed protein product [Vitis vinifera]               68   9e-10

>gb|ADP37984.1| carotenoid cleavage dioxygenase 8 [Actinidia chinensis]
          Length = 556

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/74 (56%), Positives = 49/74 (66%)
 Frame = +1

Query: 10  RNGLSFNYDVFSTTNQSMQRELTHVTNVATRPPISVPAPITESDHERKLAAWTSIRQEKW 189
           R G  F   +FS  + S       VTNVAT  P ++P P  E   +RKLAAWTSIRQE+W
Sbjct: 28  RGGSIFGKSIFSKKHNSKG---LMVTNVATELPPTIPPPKKEISDDRKLAAWTSIRQERW 84

Query: 190 EGELVVEGEIPIWL 231
           EGELVVEGEIP+WL
Sbjct: 85  EGELVVEGEIPLWL 98


>gb|AEH96363.1| carotenoid cleavage dioxygenase 8 [Solanum lycopersicum]
          Length = 557

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
 Frame = +1

Query: 70  ELTHVTNVATRPPISVPAPITES-DHERKLAAWTSIRQEKWEGELVVEGEIPIWL 231
           +L  VT VA + P+ VP P  E    E+KLAAWTS+RQE+WEGELVVEGE+P+WL
Sbjct: 45  DLKLVTKVANQLPVIVPPPDQEVISKEKKLAAWTSVRQERWEGELVVEGELPLWL 99


>ref|XP_002281239.1| PREDICTED: carotenoid cleavage dioxygenase 8, chloroplastic-like
           [Vitis vinifera]
          Length = 546

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 6/56 (10%)
 Frame = +1

Query: 82  VTNVATRPPISVPAPITE------SDHERKLAAWTSIRQEKWEGELVVEGEIPIWL 231
           V NVATR P +  +P T+        +ERKLAAWTSIRQE+WEGEL V+GEIP+WL
Sbjct: 33  VRNVATRLPETQVSPETQVSPEKGGGNERKLAAWTSIRQERWEGELAVQGEIPLWL 88


>ref|XP_002324797.1| predicted protein [Populus trichocarpa] gi|222866231|gb|EEF03362.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/74 (45%), Positives = 45/74 (60%)
 Frame = +1

Query: 10  RNGLSFNYDVFSTTNQSMQRELTHVTNVATRPPISVPAPITESDHERKLAAWTSIRQEKW 189
           R GLSF   +F+          + VT VAT+ P  +P+   E   +R   AWTS++QE+W
Sbjct: 10  REGLSFGKGIFARKRDPRD---SVVTKVATQAPTVIPSLEKELAGDRNHVAWTSVQQERW 66

Query: 190 EGELVVEGEIPIWL 231
           EGEL VEGEIP+WL
Sbjct: 67  EGELAVEGEIPLWL 80


>emb|CBI20852.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 6/56 (10%)
 Frame = +1

Query: 82  VTNVATRPPISVPAPITE------SDHERKLAAWTSIRQEKWEGELVVEGEIPIWL 231
           V NVATR P +  +P T+        +ERKLAAWTSIRQE+WEGEL V+GEIP+WL
Sbjct: 50  VRNVATRLPETQVSPETQVSPEKGGGNERKLAAWTSIRQERWEGELAVQGEIPLWL 105


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