BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020810
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6...   422   e-116
gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopers...   419   e-115
ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6...   416   e-114
ref|XP_002315298.1| light-harvesting complex I protein Lhca1 [Po...   412   e-113
emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-b...   412   e-113

>ref|XP_004143800.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic-like
           [Cucumis sativus] gi|449525097|ref|XP_004169556.1|
           PREDICTED: chlorophyll a-b binding protein 6A,
           chloroplastic-like [Cucumis sativus]
          Length = 246

 Score =  422 bits (1086), Expect = e-116
 Identities = 204/246 (82%), Positives = 215/246 (87%), Gaps = 1/246 (0%)
 Frame = -2

Query: 853 MASNALRSCGVAAV-FPXXXXXXXXXXXXXXXXSGVSTNASSRFTMSAEWMPGQPRPAHL 677
           MASN L SCG+A   FP                SGV+ NASSRF+MSAEWMPGQPRP +L
Sbjct: 1   MASNTLMSCGIATTAFPSVLSSSKSKFAVGVPISGVAVNASSRFSMSAEWMPGQPRPPYL 60

Query: 676 DGSAPGDFGFDPLGLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEW 497
           DGSAPGDFGFDPLGLG VPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWV+AQEW
Sbjct: 61  DGSAPGDFGFDPLGLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEW 120

Query: 496 AALPGGQATYLGNPVPWGTLPIILAIEFLAISFVEHQRSMEKDTEKKKYPGGAFDPLGYS 317
           AA+PGGQATYLG PVPWGTLP IL IEFLAI+FVEHQRSMEKD EKKKYPGGAFDPLGYS
Sbjct: 121 AAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYS 180

Query: 316 KDPAKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVI 137
           KDP K +EYK+KEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDI+I
Sbjct: 181 KDPEKLKEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIII 240

Query: 136 PRSIYP 119
           PR+I P
Sbjct: 241 PRTISP 246


>gb|AAA34140.1| chlorophyll a/b-binding protein [Solanum lycopersicum]
           gi|225895|prf||1402358A photosystem I protein CAB
          Length = 246

 Score =  419 bits (1076), Expect = e-115
 Identities = 198/245 (80%), Positives = 216/245 (88%)
 Frame = -2

Query: 853 MASNALRSCGVAAVFPXXXXXXXXXXXXXXXXSGVSTNASSRFTMSAEWMPGQPRPAHLD 674
           MASN L SCG+ AV P                S  +TN+ SRF+MSA+WMPGQPRP++LD
Sbjct: 1   MASNTLMSCGIPAVCPSFLSSTKSKFAAAMPVSVGATNSMSRFSMSADWMPGQPRPSYLD 60

Query: 673 GSAPGDFGFDPLGLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 494
           GSAPGDFGFDPLGLG VP NLER+KESELIHCRWAMLAVPGI+VPEALGLGNWV+AQEWA
Sbjct: 61  GSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWA 120

Query: 493 ALPGGQATYLGNPVPWGTLPIILAIEFLAISFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 314
           A+PGGQATYLG PVPWGTLP ILAIEFLAI+FVEHQRSMEKD+EKKKYPGGAFDPLGYSK
Sbjct: 121 AIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSK 180

Query: 313 DPAKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIP 134
           DPAKFEE K+KEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD++IP
Sbjct: 181 DPAKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIP 240

Query: 133 RSIYP 119
           + I+P
Sbjct: 241 KGIFP 245


>ref|XP_002275552.1| PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic
           isoform 1 [Vitis vinifera] gi|147800947|emb|CAN75566.1|
           hypothetical protein VITISV_032585 [Vitis vinifera]
          Length = 244

 Score =  416 bits (1070), Expect = e-114
 Identities = 199/245 (81%), Positives = 212/245 (86%)
 Frame = -2

Query: 853 MASNALRSCGVAAVFPXXXXXXXXXXXXXXXXSGVSTNASSRFTMSAEWMPGQPRPAHLD 674
           MAS  LRSCGVAAV P                   +   S+R TMSA+WMPGQPRP +LD
Sbjct: 1   MASTVLRSCGVAAVAPSLLSSSKSKFATSLPLPNAAAG-SARVTMSADWMPGQPRPPYLD 59

Query: 673 GSAPGDFGFDPLGLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 494
           GSAPGDFGFDPL LG VPENLER+KESELIHCRWAMLAVPG+LVPEALGLGNWVQAQEWA
Sbjct: 60  GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGVLVPEALGLGNWVQAQEWA 119

Query: 493 ALPGGQATYLGNPVPWGTLPIILAIEFLAISFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 314
           A+PGGQATYLGNPVPWG LP ILAIEFLAI+FVEHQRSMEKDTEKKKYPGGAFDPLGYSK
Sbjct: 120 AIPGGQATYLGNPVPWGNLPTILAIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 179

Query: 313 DPAKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIP 134
           DP KFEEYK+KEIKNGRLA+LAFVGFCVQQSAYPGTGPLENLA+HLADPWHNNIGD++IP
Sbjct: 180 DPVKFEEYKVKEIKNGRLAILAFVGFCVQQSAYPGTGPLENLASHLADPWHNNIGDVIIP 239

Query: 133 RSIYP 119
           RSI P
Sbjct: 240 RSIMP 244


>ref|XP_002315298.1| light-harvesting complex I protein Lhca1 [Populus trichocarpa]
           gi|118489209|gb|ABK96411.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222864338|gb|EEF01469.1|
           light-harvesting complex I protein Lhca1 [Populus
           trichocarpa]
          Length = 243

 Score =  412 bits (1059), Expect = e-113
 Identities = 197/245 (80%), Positives = 210/245 (85%)
 Frame = -2

Query: 853 MASNALRSCGVAAVFPXXXXXXXXXXXXXXXXSGVSTNASSRFTMSAEWMPGQPRPAHLD 674
           MA+N L SCG+A  FP                  V  N +SR TMSA WMPGQPRP +LD
Sbjct: 1   MATNTLMSCGIATAFPSLLSSSKSKFASSIPLPSV--NGTSRVTMSANWMPGQPRPPYLD 58

Query: 673 GSAPGDFGFDPLGLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 494
           GSAPGDFGFDPL LG VPENLER+KESELIHCRWAMLAVPGILVPEALGLGNWV+AQEWA
Sbjct: 59  GSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 118

Query: 493 ALPGGQATYLGNPVPWGTLPIILAIEFLAISFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 314
           A PGGQATYLG PVPWGTLPIILAIEF+AI+FVEHQRSMEKDTEKKKYPGGAFDPLGYSK
Sbjct: 119 ATPGGQATYLGQPVPWGTLPIILAIEFVAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 178

Query: 313 DPAKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIP 134
           DP KFEEYK+KEIKNGRLALLAFVG CVQQ+AYPGTGPLENLATHLADPWHNNIGD++IP
Sbjct: 179 DPQKFEEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDVLIP 238

Query: 133 RSIYP 119
           RS+ P
Sbjct: 239 RSVSP 243


>emb|CAA45523.1| photosystem I light-harvesting chlorophyll a/b-binding protein
           [Nicotiana tabacum]
          Length = 245

 Score =  412 bits (1058), Expect = e-113
 Identities = 197/245 (80%), Positives = 210/245 (85%)
 Frame = -2

Query: 853 MASNALRSCGVAAVFPXXXXXXXXXXXXXXXXSGVSTNASSRFTMSAEWMPGQPRPAHLD 674
           MASN L SCG+AAV P                   + + +SRF+MSAEWMPGQPRP +LD
Sbjct: 1   MASNTLMSCGIAAVSPSVLSSSYSKFAVAVPVCVGAVSGNSRFSMSAEWMPGQPRPPYLD 60

Query: 673 GSAPGDFGFDPLGLGAVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWA 494
           GSAPGDFGFDPLGLG VP NLER+KESELIHCRWAMLAVPGILVPEALGLGNWV+AQEWA
Sbjct: 61  GSAPGDFGFDPLGLGEVPSNLERYKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWA 120

Query: 493 ALPGGQATYLGNPVPWGTLPIILAIEFLAISFVEHQRSMEKDTEKKKYPGGAFDPLGYSK 314
           A+PGGQATYLG PVPWGTLP ILAIEFLAI+FVEHQRSMEKD EKKKYPGGAFDPLGYSK
Sbjct: 121 AIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSK 180

Query: 313 DPAKFEEYKLKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIP 134
           DP KFEE K+KEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD++I 
Sbjct: 181 DPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDVIIL 240

Query: 133 RSIYP 119
           R I P
Sbjct: 241 RGILP 245