BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020788
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|2...   153   3e-35
ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein A...   152   6e-35
ref|XP_002524078.1| ring finger protein, putative [Ricinus commu...   151   1e-34
ref|XP_002308329.1| predicted protein [Populus trichocarpa] gi|2...   146   3e-33
ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like...   145   6e-33

>ref|XP_002323373.1| predicted protein [Populus trichocarpa] gi|222868003|gb|EEF05134.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  153 bits (386), Expect = 3e-35
 Identities = 78/132 (59%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
 Frame = +2

Query: 86  SERINGVGYFYGVTVXXXXXXXXXXXXSFFCNRVLTRPSPPQ-QSSRDAQSNL-SIAVEI 259
           S  I G GY  GV++            S+FC R      P Q ++S D Q NL S  VEI
Sbjct: 4   SNNIGGFGYGIGVSIGILLLITTITLASYFCARNQQTSVPSQGRNSADQQLNLQSFVVEI 63

Query: 260 GLDETTLQSYPTLLYSEAKF-KNKETTSCCSICLSDYKDTDVLRVLPDCGHVFHGRCVDP 436
           GLDE TL+SYPTLLYSEAK  K   T++CCSICL+DYK TD LR+LPDCGH+FH +CVDP
Sbjct: 64  GLDEATLKSYPTLLYSEAKLHKTDSTSTCCSICLADYKSTDKLRLLPDCGHLFHLKCVDP 123

Query: 437 WLRLHPTCPVCR 472
           WLRLHPTCPVCR
Sbjct: 124 WLRLHPTCPVCR 135


>ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
           sativus]
          Length = 172

 Score =  152 bits (383), Expect = 6e-35
 Identities = 77/147 (52%), Positives = 96/147 (65%), Gaps = 8/147 (5%)
 Frame = +2

Query: 56  NDTINAGGVLSE-RINGVGYFYGVTVXXXXXXXXXXXXSFFCNR-----VLTRPSPPQQS 217
           N T   GG LS   I G GY  GV++            S++C R      + + +PP +S
Sbjct: 3   NGTAETGGFLSSSNIGGFGYGIGVSLGLLILITTILLASYYCTRNGLSSSVVQRTPPNRS 62

Query: 218 SRDAQSNL-SIAVEIGLDETTLQSYPTLLYSEAKF-KNKETTSCCSICLSDYKDTDVLRV 391
              A   + S+ V+IGLD+ T+ SYP LLYSEAK  KN  T SCCSICL+DYK++DVLR+
Sbjct: 63  PPQAVGEMDSVVVDIGLDQETITSYPKLLYSEAKLQKNDSTASCCSICLADYKNSDVLRL 122

Query: 392 LPDCGHVFHGRCVDPWLRLHPTCPVCR 472
           LPDCGH+FH +CVDPWLRLHPTCPVCR
Sbjct: 123 LPDCGHLFHLKCVDPWLRLHPTCPVCR 149


>ref|XP_002524078.1| ring finger protein, putative [Ricinus communis]
           gi|223536646|gb|EEF38288.1| ring finger protein,
           putative [Ricinus communis]
          Length = 172

 Score =  151 bits (381), Expect = 1e-34
 Identities = 76/149 (51%), Positives = 96/149 (64%), Gaps = 9/149 (6%)
 Frame = +2

Query: 53  MNDTINAGGVL-SERINGVGYFYGVTVXXXXXXXXXXXXSFFCNRVLTRPSPPQQSSRDA 229
           MN+T + GG L S  I G GY  GV++            S+FC R   +     Q+ R  
Sbjct: 1   MNNTSSGGGFLGSNDIGGFGYGIGVSIGILLLITTITLASYFCTRNHQQQQQSMQTRRRN 60

Query: 230 QSN-------LSIAVEIGLDETTLQSYPTLLYSEAKFKNKETTS-CCSICLSDYKDTDVL 385
           +S          I VE+G+DE TL++YP LLYS+AK  N +TT+ CCSICL+DYK TD+L
Sbjct: 61  RSEEPPDDRLQDIVVEVGIDEATLKNYPKLLYSQAKLHNTDTTATCCSICLADYKSTDML 120

Query: 386 RVLPDCGHVFHGRCVDPWLRLHPTCPVCR 472
           R+LPDCGH+FH +CVDPWLRLHPTCPVCR
Sbjct: 121 RLLPDCGHLFHLKCVDPWLRLHPTCPVCR 149


>ref|XP_002308329.1| predicted protein [Populus trichocarpa] gi|222854305|gb|EEE91852.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  146 bits (368), Expect = 3e-33
 Identities = 73/127 (57%), Positives = 86/127 (67%), Gaps = 3/127 (2%)
 Frame = +2

Query: 101 GVGYFYGVTVXXXXXXXXXXXXSFFCNRVLTRPSPPQ-QSSRDAQSNL-SIAVEIGLDET 274
           G GY  G+++            S+FC R      P Q ++  D Q NL +  V+IGLDE 
Sbjct: 1   GFGYGIGISIGILLLITTITLTSYFCTRNQLASVPTQARNVADQQLNLQNFVVDIGLDEA 60

Query: 275 TLQSYPTLLYSEAKF-KNKETTSCCSICLSDYKDTDVLRVLPDCGHVFHGRCVDPWLRLH 451
           TL SYPTLLYSEAK  K   T +CCSICL+DYK+TD LR+LPDCGH+FH RCVDPWLRLH
Sbjct: 61  TLNSYPTLLYSEAKLHKTGSTATCCSICLADYKNTDKLRLLPDCGHLFHLRCVDPWLRLH 120

Query: 452 PTCPVCR 472
           PTCPVCR
Sbjct: 121 PTCPVCR 127


>ref|XP_002269714.1| PREDICTED: RING-H2 finger protein ATL70-like [Vitis vinifera]
          Length = 169

 Score =  145 bits (366), Expect = 6e-33
 Identities = 71/146 (48%), Positives = 95/146 (65%), Gaps = 6/146 (4%)
 Frame = +2

Query: 53  MNDTINAGGVL-SERINGVGYFYGVTVXXXXXXXXXXXXSFFCNRVLTRPSPPQQSSRDA 229
           MN T ++GG L S  I G+GY  GV+V            S+FC R    P+         
Sbjct: 1   MNGTADSGGFLGSNNIGGLGYGIGVSVGILLLITTITLASYFCTRPQQVPAAAYGGGGGL 60

Query: 230 QSNLSIA----VEIGLDETTLQSYPTLLYSEAKFKNKETTS-CCSICLSDYKDTDVLRVL 394
           +    +     V++GLDE T+ SYP ++YSEAK ++K++T+ CCSICL+DYK +D+LR+L
Sbjct: 61  REQQPVVEEFVVDVGLDEATILSYPKMVYSEAKLQHKDSTAACCSICLADYKGSDMLRLL 120

Query: 395 PDCGHVFHGRCVDPWLRLHPTCPVCR 472
           PDCGH+FH +CVDPWLRLHPTCPVCR
Sbjct: 121 PDCGHLFHLKCVDPWLRLHPTCPVCR 146