BLASTX nr result

ID: Coptis21_contig00020779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020779
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317485.1| predicted protein [Populus trichocarpa] gi|2...    59   2e-06

>ref|XP_002317485.1| predicted protein [Populus trichocarpa] gi|222860550|gb|EEE98097.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 30/53 (56%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
 Frame = +2

Query: 227 PVAPSQV-QHSDFEFGSSTSKIPINDPNKDTPADVLFHNGRLLPHSYQCPSQK 382
           P  PS + Q SDFEFG  T   P  DPNK +PAD LF NGRLLPHS+    Q+
Sbjct: 35  PSTPSTLDQDSDFEFGCLTPDSPSRDPNKSSPADHLFFNGRLLPHSFPVLQQQ 87


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