BLASTX nr result

ID: Coptis21_contig00020751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020751
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277851.2| PREDICTED: uncharacterized protein LOC100259...   131   6e-29
ref|XP_002326236.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29
ref|XP_002528638.1| conserved hypothetical protein [Ricinus comm...   129   3e-28
ref|XP_003590397.1| hypothetical protein MTR_1g061640 [Medicago ...   127   1e-27
ref|NP_001235465.1| SHOOT2 protein [Glycine max] gi|14579399|gb|...   124   1e-26

>ref|XP_002277851.2| PREDICTED: uncharacterized protein LOC100259589 [Vitis vinifera]
          Length = 470

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/99 (65%), Positives = 82/99 (82%), Gaps = 4/99 (4%)
 Frame = +3

Query: 3   VL*DGSKTLWEQRQWMMSRMLQLEEQKVTYQCQALELEMQKVKWLKFSAKKEREMERMKL 182
           VL DG+K+  E++QWM SRM+QLEEQ+V+YQC+A ELE Q++KW+KFS+KKEREMER KL
Sbjct: 363 VLQDGTKSTLEKKQWMRSRMMQLEEQRVSYQCKAFELEKQRLKWVKFSSKKEREMEREKL 422

Query: 183 NNERMRLENEKMVLLLRNKELKLIHIH----QQQQSSNK 287
            N+R RLENE+M LLLR KE++L+ IH    QQQ SSNK
Sbjct: 423 VNQRKRLENERMALLLRQKEVELLEIHHQQQQQQHSSNK 461


>ref|XP_002326236.1| predicted protein [Populus trichocarpa] gi|222833429|gb|EEE71906.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  131 bits (329), Expect = 6e-29
 Identities = 66/106 (62%), Positives = 83/106 (78%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   VL*DGSKTLWEQRQWMMSRMLQLEEQKVTYQCQALELEMQKVKWLKFSAKKEREMERMKL 182
           VL DG+K+ WE+ QWM  +++QLEEQ+V YQCQA ELE Q++KW++FS+KKEREMER KL
Sbjct: 378 VLRDGAKSSWEKNQWMKLKLMQLEEQQVNYQCQAFELEKQRLKWVRFSSKKEREMERAKL 437

Query: 183 NNERMRLENEKMVLLLRNKELKLIH-IHQQQQ-SSNKGPCPSDMTG 314
            NER RLENE+MVL +R KEL+L+   HQQQQ  SNK   PS + G
Sbjct: 438 ENERKRLENERMVLTVRKKELELLDTTHQQQQLPSNKRSDPSSIAG 483


>ref|XP_002528638.1| conserved hypothetical protein [Ricinus communis]
           gi|223531927|gb|EEF33741.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 499

 Score =  129 bits (323), Expect = 3e-28
 Identities = 65/113 (57%), Positives = 87/113 (76%), Gaps = 9/113 (7%)
 Frame = +3

Query: 3   VL*DGSKTLWEQRQWMMSRMLQLEEQKVTYQCQALELEMQKVKWLKFSAKKEREMERMKL 182
           V+ DG+K+ WE++ WM  R +QLEEQ+++YQCQA ELE Q++KW+KFS+KKEREME+ KL
Sbjct: 387 VIQDGAKSPWEKKHWMKLRSMQLEEQQLSYQCQAFELEKQRLKWVKFSSKKEREMEKAKL 446

Query: 183 NNERMRLENEKMVLLLRNKELKLI--------HIHQQQQ-SSNKGPCPSDMTG 314
           +N+R  LE+E+MVLL+R KEL+L+        H HQQQQ SSNK   PS +TG
Sbjct: 447 DNDRRMLESERMVLLIRQKELELLDLQQQQHHHHHQQQQLSSNKRGDPSSITG 499


>ref|XP_003590397.1| hypothetical protein MTR_1g061640 [Medicago truncatula]
           gi|140052425|gb|ABE80120.2| Homeodomain-like [Medicago
           truncatula] gi|355479445|gb|AES60648.1| hypothetical
           protein MTR_1g061640 [Medicago truncatula]
          Length = 496

 Score =  127 bits (318), Expect = 1e-27
 Identities = 56/91 (61%), Positives = 76/91 (83%)
 Frame = +3

Query: 12  DGSKTLWEQRQWMMSRMLQLEEQKVTYQCQALELEMQKVKWLKFSAKKEREMERMKLNNE 191
           DG K+ WE++QW+ +R++QLEEQK+ Y+ QA +LE Q++KW ++S+KKEREMER KL NE
Sbjct: 403 DGGKSTWEKKQWIRNRIMQLEEQKIGYESQAFQLEKQRLKWARYSSKKEREMERAKLENE 462

Query: 192 RMRLENEKMVLLLRNKELKLIHIHQQQQSSN 284
           R RLENE+MVLL+R KEL+L+HI QQQQ  +
Sbjct: 463 RRRLENERMVLLIRKKELELMHIQQQQQQQH 493


>ref|NP_001235465.1| SHOOT2 protein [Glycine max] gi|14579399|gb|AAK69274.1| unknown
           [Glycine max]
          Length = 408

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/90 (64%), Positives = 76/90 (84%)
 Frame = +3

Query: 3   VL*DGSKTLWEQRQWMMSRMLQLEEQKVTYQCQALELEMQKVKWLKFSAKKEREMERMKL 182
           VL DG K+ WE++QWM  R++QLEEQ+V+YQ QA ELE Q++KW +FS+KKEREME+ KL
Sbjct: 299 VLQDGGKSAWEKKQWMKKRVVQLEEQQVSYQMQAFELEKQRLKWARFSSKKEREMEKDKL 358

Query: 183 NNERMRLENEKMVLLLRNKELKLIHIHQQQ 272
            NER RLE E+MVLLLR+KEL+L+++ QQQ
Sbjct: 359 QNERRRLEIERMVLLLRHKELELVNVQQQQ 388


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