BLASTX nr result

ID: Coptis21_contig00020741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020741
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like...    82   6e-14
ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
gb|EEE51075.1| hypothetical protein OsJ_31772 [Oryza sativa Japo...    74   9e-12
gb|EEC67090.1| hypothetical protein OsI_33882 [Oryza sativa Indi...    74   9e-12
gb|ABG66112.1| expressed protein [Oryza sativa Japonica Group]         74   9e-12

>ref|XP_002274489.2| PREDICTED: LOW QUALITY PROTEIN: midasin-like [Vitis vinifera]
          Length = 5286

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 50/109 (45%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
 Frame = +2

Query: 62  LAELFLNGNYTIPIMGRF*PMVPDIVDKAXXXXXXXXXXXXRSENDLSKMDIXXXXXXXX 241
           LAELF++  YTIP+MG F P+   IVDKA             S   L++++         
Sbjct: 48  LAELFIHPKYTIPMMGCFRPICRKIVDKAVALLRLVPNLRYNSNGTLTEVEEDKLLGEAG 107

Query: 242 XXXXXG--FVIDTFVTSGRGLQLHEAACLAFSRALDLAPFLLRSVLSYF 382
                G   VI+ F  +G GL LHE ACLAF RALDLAPFLL S LSYF
Sbjct: 108 NFEDAGDASVIEFFARNGWGLNLHELACLAFCRALDLAPFLLGSTLSYF 156


>ref|XP_002327931.1| predicted protein [Populus trichocarpa] gi|222837340|gb|EEE75719.1|
           predicted protein [Populus trichocarpa]
          Length = 5317

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 46/107 (42%), Positives = 59/107 (55%)
 Frame = +2

Query: 62  LAELFLNGNYTIPIMGRF*PMVPDIVDKAXXXXXXXXXXXXRSENDLSKMDIXXXXXXXX 241
           LAELFLN NYTIP++G F P+   IVD+A              + + + +D         
Sbjct: 48  LAELFLNPNYTIPLIGSFRPVARKIVDQAVALLRNCNLSSDSDDIEGNFVDADVL----- 102

Query: 242 XXXXXGFVIDTFVTSGRGLQLHEAACLAFSRALDLAPFLLRSVLSYF 382
                 +VI+ +  SGRGL+LHE ACLAF RALDL   LL SV +YF
Sbjct: 103 ------YVIEHYERSGRGLELHELACLAFCRALDLDHSLLGSVTTYF 143


>gb|EEE51075.1| hypothetical protein OsJ_31772 [Oryza sativa Japonica Group]
          Length = 5128

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/107 (37%), Positives = 62/107 (57%)
 Frame = +2

Query: 62  LAELFLNGNYTIPIMGRF*PMVPDIVDKAXXXXXXXXXXXXRSENDLSKMDIXXXXXXXX 241
           LAE  L+  YT+P++G F P+ P ++D+A            RS++  ++           
Sbjct: 50  LAEPLLHPRYTVPVVGCFLPLAPALLDRAVGLLRAAGAAALRSDDPAAREGEEAGEGDLR 109

Query: 242 XXXXXGFVIDTFVTSGRGLQLHEAACLAFSRALDLAPFLLRSVLSYF 382
                  V++ +++ GRGL+LHE ACLA +RALDLAP+LLR +L+YF
Sbjct: 110 -------VVEFYLSRGRGLRLHEIACLALARALDLAPYLLRHLLNYF 149


>gb|EEC67090.1| hypothetical protein OsI_33882 [Oryza sativa Indica Group]
          Length = 5024

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/107 (37%), Positives = 62/107 (57%)
 Frame = +2

Query: 62  LAELFLNGNYTIPIMGRF*PMVPDIVDKAXXXXXXXXXXXXRSENDLSKMDIXXXXXXXX 241
           LAE  L+  YT+P++G F P+ P ++D+A            RS++  ++           
Sbjct: 53  LAEPLLHPRYTVPVVGCFLPLAPALLDRAVGLLRAAGAAALRSDDPAAREGEEAGEGDLR 112

Query: 242 XXXXXGFVIDTFVTSGRGLQLHEAACLAFSRALDLAPFLLRSVLSYF 382
                  V++ +++ GRGL+LHE ACLA +RALDLAP+LLR +L+YF
Sbjct: 113 -------VVEFYLSRGRGLRLHEIACLALARALDLAPYLLRHLLNYF 152


>gb|ABG66112.1| expressed protein [Oryza sativa Japonica Group]
          Length = 5157

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/107 (37%), Positives = 62/107 (57%)
 Frame = +2

Query: 62  LAELFLNGNYTIPIMGRF*PMVPDIVDKAXXXXXXXXXXXXRSENDLSKMDIXXXXXXXX 241
           LAE  L+  YT+P++G F P+ P ++D+A            RS++  ++           
Sbjct: 50  LAEPLLHPRYTVPVVGCFLPLAPALLDRAVGLLRAAGAAALRSDDPAAREGEEAGEGDLR 109

Query: 242 XXXXXGFVIDTFVTSGRGLQLHEAACLAFSRALDLAPFLLRSVLSYF 382
                  V++ +++ GRGL+LHE ACLA +RALDLAP+LLR +L+YF
Sbjct: 110 -------VVEFYLSRGRGLRLHEIACLALARALDLAPYLLRHLLNYF 149


Top