BLASTX nr result

ID: Coptis21_contig00020738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020738
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517509.1| novel plant snare, putative [Ricinus communi...   128   6e-28
ref|XP_002282944.1| PREDICTED: novel plant SNARE 11 [Vitis vinif...   125   4e-27
emb|CAN77481.1| hypothetical protein VITISV_030969 [Vitis vinifera]   125   4e-27
ref|XP_002329593.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_002326490.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26

>ref|XP_002517509.1| novel plant snare, putative [Ricinus communis]
           gi|223543520|gb|EEF45051.1| novel plant snare, putative
           [Ricinus communis]
          Length = 272

 Score =  128 bits (321), Expect = 6e-28
 Identities = 68/93 (73%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   DTAAALKAQTDQMSRIVNELDSIHFSIKKASQLVKDIGRQVATDRCIMAXXXXXXXXXXX 180
           DTAAALKAQT+QMSRIVNELDSIHFSIKKASQLVK+IGRQVATD+CIMA           
Sbjct: 169 DTAAALKAQTEQMSRIVNELDSIHFSIKKASQLVKEIGRQVATDKCIMAMLFLIVAGVIA 228

Query: 181 XXXXXXXNPNNKDIRDIPGLGPPAA-RRLLWDP 276
                  NPNNKDIRDIPGL PPA  RRLLW P
Sbjct: 229 IIIVKLVNPNNKDIRDIPGLAPPAQNRRLLWHP 261


>ref|XP_002282944.1| PREDICTED: novel plant SNARE 11 [Vitis vinifera]
           gi|297742193|emb|CBI33980.3| unnamed protein product
           [Vitis vinifera]
          Length = 261

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/93 (69%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   DTAAALKAQTDQMSRIVNELDSIHFSIKKASQLVKDIGRQVATDRCIMAXXXXXXXXXXX 180
           +TAAALK+QT+QMSRIVNELDSIHFSIKKASQLVK+IGRQVATDRCIMA           
Sbjct: 168 ETAAALKSQTEQMSRIVNELDSIHFSIKKASQLVKEIGRQVATDRCIMALLFILVIGVIA 227

Query: 181 XXXXXXXNPNNKDIRDIPGLGPPA-ARRLLWDP 276
                  NPNNKDIRD+PGL PPA  R+LLW P
Sbjct: 228 VIIVKLVNPNNKDIRDVPGLAPPALTRKLLWHP 260


>emb|CAN77481.1| hypothetical protein VITISV_030969 [Vitis vinifera]
          Length = 261

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/93 (69%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   DTAAALKAQTDQMSRIVNELDSIHFSIKKASQLVKDIGRQVATDRCIMAXXXXXXXXXXX 180
           +TAAALK+QT+QMSRIVNELDSIHFSIKKASQLVK+IGRQVATDRCIMA           
Sbjct: 168 ETAAALKSQTEQMSRIVNELDSIHFSIKKASQLVKEIGRQVATDRCIMALLFILVIGVIA 227

Query: 181 XXXXXXXNPNNKDIRDIPGLGPPA-ARRLLWDP 276
                  NPNNKDIRD+PGL PPA  R+LLW P
Sbjct: 228 VIIVKLVNPNNKDIRDVPGLAPPALTRKLLWHP 260


>ref|XP_002329593.1| predicted protein [Populus trichocarpa] gi|222870302|gb|EEF07433.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  124 bits (312), Expect = 6e-27
 Identities = 66/93 (70%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   DTAAALKAQTDQMSRIVNELDSIHFSIKKASQLVKDIGRQVATDRCIMAXXXXXXXXXXX 180
           +TAAALKAQT+QMSRIVNELDSIHFSIKKASQLVK+IGRQVATD+CIMA           
Sbjct: 169 ETAAALKAQTEQMSRIVNELDSIHFSIKKASQLVKEIGRQVATDKCIMALLFLIVVGVIA 228

Query: 181 XXXXXXXNPNNKDIRDIPGLGPPA-ARRLLWDP 276
                  NP+NKDIRDIPGL PPA +RRLLW P
Sbjct: 229 IIIVKLVNPSNKDIRDIPGLAPPAPSRRLLWIP 261


>ref|XP_002326490.1| predicted protein [Populus trichocarpa] gi|222833812|gb|EEE72289.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score =  124 bits (310), Expect = 1e-26
 Identities = 64/93 (68%), Positives = 72/93 (77%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   DTAAALKAQTDQMSRIVNELDSIHFSIKKASQLVKDIGRQVATDRCIMAXXXXXXXXXXX 180
           +TA ALKAQT+QMSRIVNELDSIHFSIKKAS++VK+IGRQVATD+CIMA           
Sbjct: 169 ETAEALKAQTEQMSRIVNELDSIHFSIKKASKMVKEIGRQVATDKCIMALLFLVVIGVIA 228

Query: 181 XXXXXXXNPNNKDIRDIPGLGPPA-ARRLLWDP 276
                  NPNNKDIRDIPGL PPA +RRLLW+P
Sbjct: 229 IIIVKLVNPNNKDIRDIPGLAPPAQSRRLLWNP 261


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