BLASTX nr result

ID: Coptis21_contig00020697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020697
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34868.3| unnamed protein product [Vitis vinifera]              242   2e-62
ref|XP_002272892.1| PREDICTED: SCF E3 ubiquitin ligase complex F...   242   2e-62
emb|CAN59886.1| hypothetical protein VITISV_026168 [Vitis vinifera]   239   1e-61
ref|XP_002521466.1| F-box/LRR-repeat protein, putative [Ricinus ...   238   3e-61
ref|XP_004141109.1| PREDICTED: F-box/LRR-repeat protein 7-like [...   235   3e-60

>emb|CBI34868.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  242 bits (618), Expect = 2e-62
 Identities = 117/171 (68%), Positives = 146/171 (85%)
 Frame = -3

Query: 515 SLNSLLLYDGGSREGLHQFISRSRSNIQKLDLRLPLDLENNHLLAVAENIRGLISLRLQS 336
           SL+SLL+YDGGS EG  +FI++ R N++KLDLRLPLDL N+HLLA+A+N RGL  +RLQS
Sbjct: 128 SLDSLLVYDGGSEEGFLRFINQCRCNLRKLDLRLPLDLHNSHLLAIAQNCRGLSCIRLQS 187

Query: 335 CCLVTGEGLKTIGSTVSIALEELALINCDVVEREPGLLTTLGQNLKGLKKLDLSYNEMLV 156
           CCLVTG+GLK++   +   LEELALINCDVVER PG+LTTLGQNLKGL+KLDLSYNEML+
Sbjct: 188 CCLVTGDGLKSLVIAMGNGLEELALINCDVVERVPGMLTTLGQNLKGLRKLDLSYNEMLL 247

Query: 155 DMEFVSMVVSCKNLTDIKLRGCKKLTNFAVVSMYKSCKFLENVDIMHCSTI 3
           D EF+SM+VSC  L D++LRGC++LT  A+VS  K+CK+LEN+DIM+CS I
Sbjct: 248 DKEFISMLVSCNYLIDLRLRGCRRLTGAALVSTIKNCKYLENLDIMNCSGI 298


>ref|XP_002272892.1| PREDICTED: SCF E3 ubiquitin ligase complex F-box protein grrA
           [Vitis vinifera]
          Length = 470

 Score =  242 bits (618), Expect = 2e-62
 Identities = 117/171 (68%), Positives = 146/171 (85%)
 Frame = -3

Query: 515 SLNSLLLYDGGSREGLHQFISRSRSNIQKLDLRLPLDLENNHLLAVAENIRGLISLRLQS 336
           SL+SLL+YDGGS EG  +FI++ R N++KLDLRLPLDL N+HLLA+A+N RGL  +RLQS
Sbjct: 257 SLDSLLVYDGGSEEGFLRFINQCRCNLRKLDLRLPLDLHNSHLLAIAQNCRGLSCIRLQS 316

Query: 335 CCLVTGEGLKTIGSTVSIALEELALINCDVVEREPGLLTTLGQNLKGLKKLDLSYNEMLV 156
           CCLVTG+GLK++   +   LEELALINCDVVER PG+LTTLGQNLKGL+KLDLSYNEML+
Sbjct: 317 CCLVTGDGLKSLVIAMGNGLEELALINCDVVERVPGMLTTLGQNLKGLRKLDLSYNEMLL 376

Query: 155 DMEFVSMVVSCKNLTDIKLRGCKKLTNFAVVSMYKSCKFLENVDIMHCSTI 3
           D EF+SM+VSC  L D++LRGC++LT  A+VS  K+CK+LEN+DIM+CS I
Sbjct: 377 DKEFISMLVSCNYLIDLRLRGCRRLTGAALVSTIKNCKYLENLDIMNCSGI 427


>emb|CAN59886.1| hypothetical protein VITISV_026168 [Vitis vinifera]
          Length = 1027

 Score =  239 bits (611), Expect = 1e-61
 Identities = 116/171 (67%), Positives = 145/171 (84%)
 Frame = -3

Query: 515  SLNSLLLYDGGSREGLHQFISRSRSNIQKLDLRLPLDLENNHLLAVAENIRGLISLRLQS 336
            SL+SLL+YDGGS EG  +FI++ R N++KLDLRLPLDL N+HLLA+A+N RGL  +RLQS
Sbjct: 814  SLDSLLVYDGGSEEGFLRFINQCRCNLRKLDLRLPLDLHNSHLLAIAQNCRGLSCIRLQS 873

Query: 335  CCLVTGEGLKTIGSTVSIALEELALINCDVVEREPGLLTTLGQNLKGLKKLDLSYNEMLV 156
            CCLVTG+GLK++   +   LEELALINCDVVER PG+LTTLGQNLKGL+KLDLSYNEML+
Sbjct: 874  CCLVTGDGLKSLVIAMGNGLEELALINCDVVERVPGMLTTLGQNLKGLRKLDLSYNEMLL 933

Query: 155  DMEFVSMVVSCKNLTDIKLRGCKKLTNFAVVSMYKSCKFLENVDIMHCSTI 3
            D EF+SM+VSC  L D++LRGC++LT  A+VS  K+CK+LE +DIM+CS I
Sbjct: 934  DKEFISMLVSCNYLIDLRLRGCRRLTGAALVSTIKNCKYLEXLDIMNCSGI 984


>ref|XP_002521466.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223539365|gb|EEF40956.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 484

 Score =  238 bits (608), Expect = 3e-61
 Identities = 118/171 (69%), Positives = 140/171 (81%)
 Frame = -3

Query: 515 SLNSLLLYDGGSREGLHQFISRSRSNIQKLDLRLPLDLENNHLLAVAENIRGLISLRLQS 336
           SLNSLL+YDGGSREGL  FIS  R ++QKLD RLPLDL N+HLLA+A N R L  LRLQS
Sbjct: 272 SLNSLLIYDGGSREGLLHFISNCRCDLQKLDFRLPLDLNNDHLLAIAMNFRNLSILRLQS 331

Query: 335 CCLVTGEGLKTIGSTVSIALEELALINCDVVEREPGLLTTLGQNLKGLKKLDLSYNEMLV 156
           CCLVTGEGLK +G  VS  L+ELALINCDVVERE GLL TLGQNL+ LKKLDLS+NE L+
Sbjct: 332 CCLVTGEGLKALGIAVSPVLQELALINCDVVERESGLLATLGQNLRQLKKLDLSHNEFLL 391

Query: 155 DMEFVSMVVSCKNLTDIKLRGCKKLTNFAVVSMYKSCKFLENVDIMHCSTI 3
           D EF+SM+VSC +L ++KLRGCK++T  A++ M+++CK LE VDIMHC  I
Sbjct: 392 DKEFISMLVSCNSLVELKLRGCKRVTGMAMLCMFRNCKRLECVDIMHCCGI 442


>ref|XP_004141109.1| PREDICTED: F-box/LRR-repeat protein 7-like [Cucumis sativus]
          Length = 470

 Score =  235 bits (599), Expect = 3e-60
 Identities = 113/171 (66%), Positives = 141/171 (82%)
 Frame = -3

Query: 515 SLNSLLLYDGGSREGLHQFISRSRSNIQKLDLRLPLDLENNHLLAVAENIRGLISLRLQS 336
           +L SLL+YDGGSREGL QF+SR +SN+Q LDLRLPLDL+N HL+A+A N+RGL SLRLQS
Sbjct: 258 NLTSLLVYDGGSREGLLQFLSRQQSNLQSLDLRLPLDLDNEHLIAIATNLRGLSSLRLQS 317

Query: 335 CCLVTGEGLKTIGSTVSIALEELALINCDVVEREPGLLTTLGQNLKGLKKLDLSYNEMLV 156
           CCLVTG+GLK I + +S  LEELALINCDVVERE GLL T+GQNLK LK LDLSYNEML+
Sbjct: 318 CCLVTGDGLKAISTALSSHLEELALINCDVVERESGLLATMGQNLKRLKILDLSYNEMLM 377

Query: 155 DMEFVSMVVSCKNLTDIKLRGCKKLTNFAVVSMYKSCKFLENVDIMHCSTI 3
           D +F+SM +SC ++ ++ LRGCK LT  A+ +++K+CK LE +DI+ C  I
Sbjct: 378 DKDFISMAISCNSIQELNLRGCKWLTGAAIFALWKNCKELETIDIVQCPKI 428


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