BLASTX nr result

ID: Coptis21_contig00020661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020661
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21960.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_002276308.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    99   4e-19
ref|XP_003633274.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclo...    99   5e-19
emb|CBI23596.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    99   5e-19

>emb|CBI21960.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/89 (50%), Positives = 65/89 (73%)
 Frame = +3

Query: 3   VPKIFIRPPNELDYKSDSNLSQFQIPIIDLKGIEGDKKMRQEIVDGVLSASEKWGFFLVV 182
           +P +FI P    D KS+S +SQF++P+IDL G++ +  +R +I+D V  A E WGFF VV
Sbjct: 37  IPLMFIHPRYNPDAKSESAVSQFRVPLIDLDGVKDNATVRAKIIDQVRGACENWGFFQVV 96

Query: 183 NHGLPTSVMEEMIQGVFRFNEQNDEVKKE 269
           NHG+P SV+EEMI G+  F+EQ+ ++KKE
Sbjct: 97  NHGIPASVLEEMIDGIRGFHEQDTQMKKE 125



 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 43/89 (48%), Positives = 62/89 (69%)
 Frame = +3

Query: 3   VPKIFIRPPNELDYKSDSNLSQFQIPIIDLKGIEGDKKMRQEIVDGVLSASEKWGFFLVV 182
           +P +FI P    D KS S +SQF++P+IDL G+  +  +R +I+D V  A E WGF  VV
Sbjct: 362 IPLMFIHPHYNPDAKSGSAVSQFRVPLIDLDGVNDNATLRAKIIDQVREACENWGFLQVV 421

Query: 183 NHGLPTSVMEEMIQGVFRFNEQNDEVKKE 269
           NHG+P SV+EEM+ G+  F+EQ+ ++KKE
Sbjct: 422 NHGIPASVLEEMLDGIRGFHEQDTQMKKE 450


>ref|XP_002276308.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 353

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/89 (50%), Positives = 65/89 (73%)
 Frame = +3

Query: 3   VPKIFIRPPNELDYKSDSNLSQFQIPIIDLKGIEGDKKMRQEIVDGVLSASEKWGFFLVV 182
           +P +FI P    D KS+S +SQF++P+IDL G++ +  +R +I+D V  A E WGFF VV
Sbjct: 37  IPLMFIHPRYNPDAKSESAVSQFRVPLIDLDGVKDNATVRAKIIDQVRGACENWGFFQVV 96

Query: 183 NHGLPTSVMEEMIQGVFRFNEQNDEVKKE 269
           NHG+P SV+EEMI G+  F+EQ+ ++KKE
Sbjct: 97  NHGIPASVLEEMIDGIRGFHEQDTQMKKE 125


>ref|XP_003633274.1| PREDICTED: LOW QUALITY PROTEIN: 1-aminocyclopropane-1-carboxylate
           oxidase homolog 1-like [Vitis vinifera]
          Length = 369

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/89 (50%), Positives = 62/89 (69%)
 Frame = +3

Query: 3   VPKIFIRPPNELDYKSDSNLSQFQIPIIDLKGIEGDKKMRQEIVDGVLSASEKWGFFLVV 182
           +P +FI P   L+ KS S +SQF++P++DL GI     +R +I+D V  A E WGFF  V
Sbjct: 39  IPPMFIHPQYNLNAKSGSAVSQFRVPLVDLDGINDSATLRAKIIDQVREACENWGFFQAV 98

Query: 183 NHGLPTSVMEEMIQGVFRFNEQNDEVKKE 269
           NHG+P SV+EEMI G+  F+EQ+ +VKKE
Sbjct: 99  NHGIPASVLEEMIDGIRGFHEQDTQVKKE 127


>emb|CBI23596.3| unnamed protein product [Vitis vinifera]
          Length = 359

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 47/89 (52%), Positives = 65/89 (73%)
 Frame = +3

Query: 3   VPKIFIRPPNELDYKSDSNLSQFQIPIIDLKGIEGDKKMRQEIVDGVLSASEKWGFFLVV 182
           +P++FI P + L  KS S  +Q +IPIIDL+G+  D  +R +I+D V +A E WG F +V
Sbjct: 32  IPRMFIHPQHNLREKSVSTNAQLRIPIIDLEGVNSDAILRAKIIDKVRNACEIWGIFQIV 91

Query: 183 NHGLPTSVMEEMIQGVFRFNEQNDEVKKE 269
           NHG+  SV+EEMI+G+ RFNEQ+ EVKKE
Sbjct: 92  NHGILKSVLEEMIKGIRRFNEQDTEVKKE 120


>ref|XP_002284638.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 363

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/89 (56%), Positives = 65/89 (73%)
 Frame = +3

Query: 3   VPKIFIRPPNELDYKSDSNLSQFQIPIIDLKGIEGDKKMRQEIVDGVLSASEKWGFFLVV 182
           VP++FIRPP   D   D N +QF+ P+IDL G++ D   R++IV+ V  ASE WG F VV
Sbjct: 40  VPRMFIRPP---DNSRDCN-TQFKFPVIDLHGMDSDPIRRKKIVEMVREASETWGLFTVV 95

Query: 183 NHGLPTSVMEEMIQGVFRFNEQNDEVKKE 269
           NHG+P SV+EEM+ GV RF EQ++EVKKE
Sbjct: 96  NHGIPVSVLEEMMDGVHRFYEQDNEVKKE 124


Top