BLASTX nr result

ID: Coptis21_contig00020657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020657
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    66   5e-09
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    66   5e-09
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    60   2e-07
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    57   2e-06
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    56   6e-06

>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
 Frame = -2

Query: 563 GWAAAIRDHKGEVIAAAKGKTEYSTIALIELYGLKQGLKLAKKHNIRRIAAQSDSSNVVS 384
           G+   +RD++G  I A   K     I L+EL+ + +GL LA    I+ I  +SDS + V 
Sbjct: 296 GFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWRGLVLALGLGIKVIWVESDSMSAVK 355

Query: 383 FMKN-RGHPWQANHLMEEIQDYIGHLDHFTITQAHREANKLAYALAVNIPTVSFIEIVPS 207
            +   + H  +AN  +  I   +   + + ++ A RE NK A  L+  +   + + + P 
Sbjct: 356 TINRVQSHSGKANRCLNHIWALLKKFEEYKVSHAWRETNKAADYLSKMVLERNDVVLWPV 415

Query: 206 SFSEDVKKIVYEDAIGKVYAR 144
            F   ++ I+ +DA G++Y R
Sbjct: 416 HFPTTLQNIIKDDAQGRIYCR 436


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
 Frame = -2

Query: 563 GWAAAIRDHKGEVIAAAKGKTEYSTIALIELYGLKQGLKLAKKHNIRRIAAQSDSSNVVS 384
           G+    RDH G+ I A   K   + I L+EL+ + +GL LA    I+ I  +SDS +VV 
Sbjct: 177 GFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKAIWVESDSMSVVK 236

Query: 383 FMKNRGHPW--QANHLMEEIQDYIGHLDHFTITQAHREANKLAYALAVNIPTVSFIEIVP 210
            + NR  P+  +A   +  I   +G  + + ++   RE NK A  L+    + S + +  
Sbjct: 237 TI-NRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRETNKAADFLSRMDLSGSDVVLGT 295

Query: 209 SSFSEDVKKIVYEDAIGKVYAR 144
           + F   +  I+ +DA G++Y R
Sbjct: 296 ADFPNGLNSIIKDDAEGRMYRR 317


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
 Frame = -2

Query: 563 GWAAAIRDHKGEVIAAAKGKTEYSTIALIELYGLKQGLKLAKKHNIRRIAAQSDSSNVVS 384
           G+    RDH G+ I A   K   + I L+EL+ + +GL LA    I+ I  +SDS + V 
Sbjct: 290 GFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLASGLGIKAIWVESDSMSAVK 349

Query: 383 FMKNRGHPW--QANHLMEEIQDYIGHLDHFTITQAHREANKLAYALAVNIPTVSFIEIVP 210
            + NR  P+  +A   +  I   +   + + ++   RE NK A  L+    + + + +  
Sbjct: 350 TI-NRKQPYSSRAGSCLNHIWVLLEKFEKYLVSHTWRETNKAADFLSKMDLSGNDVVLGT 408

Query: 209 SSFSEDVKKIVYEDAIGKVYAR 144
           + F   +  I+ +DA G++Y R
Sbjct: 409 ADFPNGLNSIIKDDAEGRMYRR 430


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/135 (28%), Positives = 66/135 (48%)
 Frame = -2

Query: 548 IRDHKGEVIAAAKGKTEYSTIALIELYGLKQGLKLAKKHNIRRIAAQSDSSNVVSFMKNR 369
           +RD++GE I A   K     + L EL+ + +GL L+    I+ I  +SDS +VV  +  +
Sbjct: 335 LRDYRGEPICAFVSKAPQGDVFLAELWAIWRGLVLSLGLGIKAIWVESDSMSVVRTVNRK 394

Query: 368 GHPWQANHLMEEIQDYIGHLDHFTITQAHREANKLAYALAVNIPTVSFIEIVPSSFSEDV 189
               +A   + +I   +   D + I+ + RE N+ A  LA      + + + P  F   +
Sbjct: 395 QLCPKAVGYLNQIWKLLKKFDKYQISHSWRETNRAADHLAKMDLLANDVVLSPVDFPPSL 454

Query: 188 KKIVYEDAIGKVYAR 144
            +I+ +DA G  Y R
Sbjct: 455 SRIIEDDAKGTKYRR 469


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
 Frame = -2

Query: 584 NLQGTQGGWAAAIRDHKGEVIAAAKGKTEYSTIALIELYGLKQGLKLAKKHNIRRIAAQS 405
           ++     G     RD++G  I     K     I L+EL+ + +GL LA   +I+ +  +S
Sbjct: 182 SIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWRGLVLALNLHIQVLWVES 241

Query: 404 DSSNVVSFMKNRGHPW--QANHLMEEIQDYIGHLDHFTITQAHREANKLAYALAVNIPTV 231
           DS +VV+ + NR  P+  +A+  +++I+  +       ++ + RE N+ A  LA  +   
Sbjct: 242 DSLSVVNTI-NRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWRETNRAADYLAKMVVER 300

Query: 230 SFIEIVPSSFSEDVKKIVYEDAIGKVYAR 144
             + + P+ F   +  I+ +DA G VY R
Sbjct: 301 DVV-LWPADFPTSLNNIIKDDAEGMVYCR 328


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