BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020432
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27495.3| unnamed protein product [Vitis vinifera]              284   5e-75
ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containi...   284   5e-75
ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containi...   281   6e-74
emb|CBI24106.3| unnamed protein product [Vitis vinifera]              281   6e-74
ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containi...   275   4e-72

>emb|CBI27495.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  284 bits (727), Expect = 5e-75
 Identities = 129/179 (72%), Positives = 163/179 (91%)
 Frame = -1

Query: 537 VLMYVKEGPIQKSLEIVQAMKGLNIKVSDCILCAVINGYSKKRGPKESAEVYEKLVSSSC 358
           VLMYV+EG ++++LEIV+AMK + I+VSDCI CA++NG++KKRG + +A+VY++L+   C
Sbjct: 274 VLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGC 333

Query: 357 EPGQVTYASIISVYCRLGLYEKAEMVFSEMEEKGFSKCVVAYSSMVAMYGKTGRLKDAMK 178
           EPGQVTYASII+VYCR+ LY KAEMVFSEME+KGF+KCVVAYSSMV MYGKTGRL++AM+
Sbjct: 334 EPGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMR 393

Query: 177 LVAKMKERGCEPNVWVYNSLIEMHGKANNLRQVEKLWKEMNRRKIIPDKVSYTSMIKAF 1
           LVAKMKERGCEPNVWVYNSL++MHG+  NLRQVEKLWKEM R+K++PD+VSYTS+I A+
Sbjct: 394 LVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAY 452



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
 Frame = -1

Query: 468 NIKVSDCILCAVINGYSKKRGPKESAEVYEKLVSSSCEPGQVTYASIISVYCRLGLYEKA 289
           N  V+  +  + + GY+K      +  VY+++ S+   P   +Y  I+  Y ++  YEK 
Sbjct: 119 NDDVALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKV 178

Query: 288 EMVFSEMEEKGFSKCVVA---YSSMVAMYGKTGRLKDAMKLVAKMKERGCEPNVWVYNSL 118
             +F E E +       +   Y  +    GK GR  +A++    M ++G   +  VY+SL
Sbjct: 179 VTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSL 238

Query: 117 IEMHGKANNLRQVEKLWKEMNRRKIIPDKVSYTSMI 10
           I        ++  E+L++E   +KI+ D   +  ++
Sbjct: 239 ICSFASIREVKVAEELFREAEEKKILRDPEVFLKLV 274


>ref|XP_002269531.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 603

 Score =  284 bits (727), Expect = 5e-75
 Identities = 129/179 (72%), Positives = 163/179 (91%)
 Frame = -1

Query: 537 VLMYVKEGPIQKSLEIVQAMKGLNIKVSDCILCAVINGYSKKRGPKESAEVYEKLVSSSC 358
           VLMYV+EG ++++LEIV+AMK + I+VSDCI CA++NG++KKRG + +A+VY++L+   C
Sbjct: 336 VLMYVEEGLMERTLEIVKAMKNVEIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGC 395

Query: 357 EPGQVTYASIISVYCRLGLYEKAEMVFSEMEEKGFSKCVVAYSSMVAMYGKTGRLKDAMK 178
           EPGQVTYASII+VYCR+ LY KAEMVFSEME+KGF+KCVVAYSSMV MYGKTGRL++AM+
Sbjct: 396 EPGQVTYASIINVYCRMELYSKAEMVFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMR 455

Query: 177 LVAKMKERGCEPNVWVYNSLIEMHGKANNLRQVEKLWKEMNRRKIIPDKVSYTSMIKAF 1
           LVAKMKERGCEPNVWVYNSL++MHG+  NLRQVEKLWKEM R+K++PD+VSYTS+I A+
Sbjct: 456 LVAKMKERGCEPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAY 514



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
 Frame = -1

Query: 468 NIKVSDCILCAVINGYSKKRGPKESAEVYEKLVSSSCEPGQVTYASIISVYCRLGLYEKA 289
           N  V+  +  + + GY+K      +  VY+++ S+   P   +Y  I+  Y ++  YEK 
Sbjct: 181 NDDVALLVFNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKV 240

Query: 288 EMVFSEMEEKGFSKCVVA---YSSMVAMYGKTGRLKDAMKLVAKMKERGCEPNVWVYNSL 118
             +F E E +       +   Y  +    GK GR  +A++    M ++G   +  VY+SL
Sbjct: 241 VTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSL 300

Query: 117 IEMHGKANNLRQVEKLWKEMNRRKIIPDKVSYTSMI 10
           I        ++  E+L++E   +KI+ D   +  ++
Sbjct: 301 ICSFASIREVKVAEELFREAEEKKILRDPEVFLKLV 336


>ref|XP_002273494.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Vitis vinifera]
          Length = 609

 Score =  281 bits (718), Expect = 6e-74
 Identities = 126/179 (70%), Positives = 163/179 (91%)
 Frame = -1

Query: 537 VLMYVKEGPIQKSLEIVQAMKGLNIKVSDCILCAVINGYSKKRGPKESAEVYEKLVSSSC 358
           VLMYV+EG +++++EIV+AMK + I+VSDCI CA++NG++KKRG + +A+VY++L+   C
Sbjct: 337 VLMYVEEGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGC 396

Query: 357 EPGQVTYASIISVYCRLGLYEKAEMVFSEMEEKGFSKCVVAYSSMVAMYGKTGRLKDAMK 178
           EPGQVTYASII+VYCR+ LY KAEM+FSEME+KGF+KCVVAYSSMV MYGKTGRL++AM+
Sbjct: 397 EPGQVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMR 456

Query: 177 LVAKMKERGCEPNVWVYNSLIEMHGKANNLRQVEKLWKEMNRRKIIPDKVSYTSMIKAF 1
           LVAKMKERGC+PNVWVYNSL++MHG+  NLRQVEKLWKEM R+K++PD+VSYTS+I A+
Sbjct: 457 LVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAY 515



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
 Frame = -1

Query: 468 NIKVSDCILCAVINGYSKKRGPKESAEVYEKLVSSSCEPGQVTYASIISVYCRLGLYEKA 289
           N  V+  +  + + GY+K      +  VY+++ S+   P   +Y  I+  Y ++  YEK 
Sbjct: 182 NDDVALLVCNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKV 241

Query: 288 EMVFSEMEEKGFSKCVVA---YSSMVAMYGKTGRLKDAMKLVAKMKERGCEPNVWVYNSL 118
             +F E E +       +   Y  +    GK GR  +A++    M ++G   +  VY+SL
Sbjct: 242 VTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSL 301

Query: 117 IEMHGKANNLRQVEKLWKEMNRRKIIPDKVSYTSMI 10
           I        ++  E+L++E   +KI+ D   +  ++
Sbjct: 302 ICSFASIREVKVAEELFREAEEKKILRDPEVFLKLV 337


>emb|CBI24106.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  281 bits (718), Expect = 6e-74
 Identities = 126/179 (70%), Positives = 163/179 (91%)
 Frame = -1

Query: 537 VLMYVKEGPIQKSLEIVQAMKGLNIKVSDCILCAVINGYSKKRGPKESAEVYEKLVSSSC 358
           VLMYV+EG +++++EIV+AMK + I+VSDCI CA++NG++KKRG + +A+VY++L+   C
Sbjct: 260 VLMYVEEGLMERTIEIVKAMKNVKIRVSDCIFCAIVNGFAKKRGLRAAAKVYDELILQGC 319

Query: 357 EPGQVTYASIISVYCRLGLYEKAEMVFSEMEEKGFSKCVVAYSSMVAMYGKTGRLKDAMK 178
           EPGQVTYASII+VYCR+ LY KAEM+FSEME+KGF+KCVVAYSSMV MYGKTGRL++AM+
Sbjct: 320 EPGQVTYASIINVYCRMELYSKAEMMFSEMEKKGFNKCVVAYSSMVVMYGKTGRLREAMR 379

Query: 177 LVAKMKERGCEPNVWVYNSLIEMHGKANNLRQVEKLWKEMNRRKIIPDKVSYTSMIKAF 1
           LVAKMKERGC+PNVWVYNSL++MHG+  NLRQVEKLWKEM R+K++PD+VSYTS+I A+
Sbjct: 380 LVAKMKERGCKPNVWVYNSLMDMHGRVKNLRQVEKLWKEMKRKKVVPDRVSYTSVISAY 438



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
 Frame = -1

Query: 468 NIKVSDCILCAVINGYSKKRGPKESAEVYEKLVSSSCEPGQVTYASIISVYCRLGLYEKA 289
           N  V+  +  + + GY+K      +  VY+++ S+   P   +Y  I+  Y ++  YEK 
Sbjct: 105 NDDVALLVCNSAMGGYNKLHMFSSTIAVYDRMKSAGVVPNSESYYRIMEAYIKIRDYEKV 164

Query: 288 EMVFSEMEEKGFSKCVVA---YSSMVAMYGKTGRLKDAMKLVAKMKERGCEPNVWVYNSL 118
             +F E E +       +   Y  +    GK GR  +A++    M ++G   +  VY+SL
Sbjct: 165 VTLFQEFESRKIDSSPFSTQIYRILCESLGKMGRAFEALEFFRDMTKKGILEDSAVYSSL 224

Query: 117 IEMHGKANNLRQVEKLWKEMNRRKIIPDKVSYTSMI 10
           I        ++  E+L++E   +KI+ D   +  ++
Sbjct: 225 ICSFASIREVKVAEELFREAEEKKILRDPEVFLKLV 260


>ref|XP_004172063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13770,
           chloroplastic-like [Cucumis sativus]
          Length = 608

 Score =  275 bits (702), Expect = 4e-72
 Identities = 123/179 (68%), Positives = 154/179 (86%)
 Frame = -1

Query: 537 VLMYVKEGPIQKSLEIVQAMKGLNIKVSDCILCAVINGYSKKRGPKESAEVYEKLVSSSC 358
           +LMYV++G ++K+LEIV+ MK   I VSDCI CA++NGY+ +RG + + +VYEKL+   C
Sbjct: 337 ILMYVQQGSLEKALEIVEVMKDFKIGVSDCIFCAIVNGYATRRGYEAAVKVYEKLIEDGC 396

Query: 357 EPGQVTYASIISVYCRLGLYEKAEMVFSEMEEKGFSKCVVAYSSMVAMYGKTGRLKDAMK 178
           EPGQVTYAS I+ YCR+GLY KAE +F EMEEKGF KCVVAYSS+++MYGKTGRLKDAM+
Sbjct: 397 EPGQVTYASAINAYCRVGLYSKAEDIFGEMEEKGFDKCVVAYSSLISMYGKTGRLKDAMR 456

Query: 177 LVAKMKERGCEPNVWVYNSLIEMHGKANNLRQVEKLWKEMNRRKIIPDKVSYTSMIKAF 1
           L+AKMKE+GC+PNVW+YN L+EMHGKA NL+QVEKLWKEM R+KI PDKVSYTS+I A+
Sbjct: 457 LLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKIAPDKVSYTSIISAY 515



 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 37/172 (21%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
 Frame = -1

Query: 510 IQKSLEIVQAMKGLNIKVSDCILCAVINGYSKKRGPKESAEVYEKLVSSSCEPGQVTYAS 331
           ++  LE+ +   G+ +   +    A + GY+K    K +  V+++L S+  E     Y  
Sbjct: 172 VKSLLEVFERNSGVAMTAFE----AAMRGYNKLHMHKSTIMVFQRLKSARIEADSGCYCR 227

Query: 330 IISVYCRLGLYEKAEMVFSEMEEK-----GFSKCVVAYSSMVAMYGKTGRLKDAMKLVAK 166
           ++  Y +LG  E+   +F+E+E +      FS  +  Y  +     K+GR+ ++++    
Sbjct: 228 VMEAYLKLGDSERVMELFNEVESRISDSTPFSTKI--YGILCESLAKSGRVFESLEFFRD 285

Query: 165 MKERGCEPNVWVYNSLIEMHGKANNLRQVEKLWKEMNRRKIIPDKVSYTSMI 10
           M+++G   +  +Y++LI        ++  E L+ E   +K++ D   +  +I
Sbjct: 286 MRKKGIAEDYTIYSALICTFASIQEVKLAEDLYNEAKAKKLLRDPAMFLKLI 337



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/141 (23%), Positives = 69/141 (48%)
 Frame = -1

Query: 537 VLMYVKEGPIQKSLEIVQAMKGLNIKVSDCILCAVINGYSKKRGPKESAEVYEKLVSSSC 358
           + MY K G ++ ++ ++  MK    + +  I   ++  + K +  K+  ++++++     
Sbjct: 442 ISMYGKTGRLKDAMRLLAKMKEKGCQPNVWIYNILMEMHGKAKNLKQVEKLWKEMKRKKI 501

Query: 357 EPGQVTYASIISVYCRLGLYEKAEMVFSEMEEKGFSKCVVAYSSMVAMYGKTGRLKDAMK 178
            P +V+Y SIIS Y +   +EK E  + E    G +        MV ++ KT R+ + +K
Sbjct: 502 APDKVSYTSIISAYVKASEFEKCEQYYREFRMNGGTIDKAFGGIMVGVFSKTSRVDELVK 561

Query: 177 LVAKMKERGCEPNVWVYNSLI 115
           L+  MK  G   +  +Y + +
Sbjct: 562 LLRDMKLEGTRLDERLYRTAL 582