BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020167
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306065.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-33
emb|CAN73335.1| hypothetical protein VITISV_035137 [Vitis vinifera]    83   2e-17
ref|XP_002300305.1| predicted protein [Populus trichocarpa] gi|2...    89   7e-16
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...    58   1e-15
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]    61   3e-14

>ref|XP_002306065.1| predicted protein [Populus trichocarpa] gi|222849029|gb|EEE86576.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score = 90.9 bits (224), Expect(2) = 8e-33
 Identities = 54/143 (37%), Positives = 74/143 (51%)
 Frame = -1

Query: 696 MTQHCTVMRNMVAELAQAGQVLSNEQQIQAVIRSLPKTWEQFRLILTHDDSITNFAQVQR 517
           M QH TVM NM++EL  AG  +++EQQ+Q VI  LP  WE  R+ LTH+D+I  F  V R
Sbjct: 1   MRQHLTVMSNMISELRGAGHEMTDEQQVQGVICYLPSNWEHVRVNLTHNDNIKTFDDVAR 60

Query: 516 KCELEEQRLLNEKPVVQTEANVVNSKKRKAPWNXXXXXXXXXXXXKPDPQQKKPRKSIDM 337
             +LEE RL  EKP+   EA +                           QQ+   ++I  
Sbjct: 61  HIKLEEDRLHAEKPI--NEAFI--------------------------SQQEPSARAIKK 92

Query: 336 TSVECFRCHQMGHYARACPSPEI 268
           T + CF C + GH+AR C  P++
Sbjct: 93  TRI-CFNCGKPGHFARNCTEPKV 114



 Score = 75.9 bits (185), Expect(2) = 8e-33
 Identities = 31/65 (47%), Positives = 49/65 (75%)
 Frame = -3

Query: 271 DSAATDHISRDRSLFEDFRKLPQGTRRVHMGNQSVADVLGIGTCRLDFASGRSILIEEVL 92
           DS ATDHI+RDR+ F +FR++P+G++ +++GN +   VLGIGTC+LD   GR++ + +VL
Sbjct: 142 DSRATDHIARDRTTFVEFRRIPKGSKYIYIGNNASTVVLGIGTCKLDLRGGRTLYLHDVL 201

Query: 91  FVPSI 77
             P +
Sbjct: 202 CAPKV 206


>emb|CAN73335.1| hypothetical protein VITISV_035137 [Vitis vinifera]
          Length = 526

 Score = 82.8 bits (203), Expect(2) = 2e-17
 Identities = 38/90 (42%), Positives = 61/90 (67%)
 Frame = -3

Query: 271 DSAATDHISRDRSLFEDFRKLPQGTRRVHMGNQSVADVLGIGTCRLDFASGRSILIEEVL 92
           DS A DHI+RD+  + +FR++  GTR +++GN S  +V GI TC+L+ + GR++ + +VL
Sbjct: 132 DSXAXDHIARDQGAYIEFRRISSGTRWIYVGNNSKVEVKGIRTCKLELSKGRTLFLHDVL 191

Query: 91  FVPSIRRNLLSVLKLL*ESYVFNFFQNSLE 2
           + P IRRNL+S+L LL   +   F  + +E
Sbjct: 192 YAPDIRRNLVSMLVLLSLGFNLIFHDSIME 221



 Score = 32.3 bits (72), Expect(2) = 2e-17
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
 Frame = -1

Query: 561 LTHDDSITNFAQVQRKCELEEQRLLNEKPVVQTEANVVNSKKRKAPWNXXXXXXXXXXXX 382
           +TH++S+  F  + R  +LE  RL+  +P    +A V  S  RK                
Sbjct: 1   MTHNESVKTFDDIVRHLKLEVGRLVVARP--NEQAYVAESSSRKTSGFKRNRNFFKKNKK 58

Query: 381 KPDPQQK------KPRKSI--DMTSVECFRCHQMGHYARAC 283
             D  +K      K  K +  D + ++C+     GH+A  C
Sbjct: 59  SDDASKKGKIGARKKFKXVKKDXSKLKCYDYGNKGHFAHEC 99


>ref|XP_002300305.1| predicted protein [Populus trichocarpa] gi|222847563|gb|EEE85110.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 56/159 (35%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
 Frame = -1

Query: 699 SMTQHCTVMRNMVAELAQAGQVLSNEQQIQAVIRSLPKTWEQFRLILTHDDSITNFAQVQ 520
           +M QH TVM NM++EL      +++EQQ+Q VIRSLP  WE   + L H+D+I  F  V 
Sbjct: 87  TMRQHLTVMSNMISELKGVEHEMTDEQQVQPVIRSLPSNWEHMCVNLIHNDNIKTFDDVA 146

Query: 519 RKCELEEQRLLNEKPVVQTEANVVNSKKRKAPWNXXXXXXXXXXXXKP-------DPQQK 361
              ELEE R  +EKP+   EA +  +K R A  +                        ++
Sbjct: 147 HHVELEEDRFHSEKPI--NEAFISETKMRGAYGSKYKRGKAKGPKYDKRGIEASSSGHKR 204

Query: 360 KPRKSIDMT--SVECFRCHQMGHYARACPSPEIQQRQTT 250
           K  K  D    ++ CF C   GH+AR C  P+ Q++ TT
Sbjct: 205 KYGKRDDKKGKNMNCFNCGIPGHFARDCTEPKTQEQSTT 243


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score = 57.8 bits (138), Expect(2) = 1e-15
 Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
 Frame = -3

Query: 271 DSAATDHISRDRSLFEDFRKLPQGTRRVHMGNQSVADVLGIGTCRLDFASGRSILIEEVL 92
           DS AT HI  DRS+F  F+     +  V MGN   A V G G   L   SG+++++++VL
Sbjct: 320 DSGATVHICADRSMFSSFQGF--NSAPVLMGNGVPAAVRGTGQVYLKLTSGKTLVLKDVL 377

Query: 91  FVPSIRRNLLSV-------LKLL*ES 35
           +VPS+ RNL+SV       LKL+ ES
Sbjct: 378 YVPSMSRNLISVSLLCRQGLKLVFES 403



 Score = 50.8 bits (120), Expect(2) = 1e-15
 Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
 Frame = -1

Query: 699 SMTQHCTVMRNMVAELAQAGQVLSNEQQIQAVIRSLPKTWEQFRLILTHDDSITNFAQVQ 520
           S+ +    ++ +V +L Q G VL +  Q+ A++  LP +W  F     H        ++ 
Sbjct: 147 SVMEQLQEIQLLVRDLVQYGCVLPDSFQVNAILAKLPPSWRDFVTSRRHMKKQMTLTELS 206

Query: 519 RKCELEEQRLLNEKPVVQTEANVV--------NSKKRKAPWNXXXXXXXXXXXXKPDPQQ 364
               +EE+   + KP  Q +A+VV          KK+ +P                 P+ 
Sbjct: 207 AAINVEERARSSNKPSQQLQAHVVEKGGDRKFQKKKKNSPQKNLN-----------QPKS 255

Query: 363 KKPRKSIDMTSVECFRCHQMGHYARAC 283
           KK +K  D     C+ C   GH AR C
Sbjct: 256 KKMKKKEDFI---CYVCGVSGHTARRC 279


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score = 61.2 bits (147), Expect(2) = 3e-14
 Identities = 29/71 (40%), Positives = 47/71 (66%)
 Frame = -3

Query: 271 DSAATDHISRDRSLFEDFRKLPQGTRRVHMGNQSVADVLGIGTCRLDFASGRSILIEEVL 92
           D+ AT H++ D+SLF+ F    +G + V MGN+  + VLG GT  + F SG+ + ++ VL
Sbjct: 310 DTCATVHVTYDKSLFKTFEDA-KGDQEVQMGNEGKSKVLGKGTIEVVFTSGKKVTLKNVL 368

Query: 91  FVPSIRRNLLS 59
           +VP + +NL+S
Sbjct: 369 YVPDMNKNLVS 379



 Score = 42.7 bits (99), Expect(2) = 3e-14
 Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
 Frame = -1

Query: 618 QIQAVIRSLPKTWEQFRLILTHDDSITNFAQVQRKCELEEQRLLNEKPVVQT-----EAN 454
           Q+ A++  LP +W+ +R  + H     +  ++Q+   +EE+    +K V ++     +AN
Sbjct: 161 QVGAIVAKLPSSWKGYRKRILHKSEDYSLEEIQKHLRIEEESRSRDKMVEESNGGTNKAN 220

Query: 453 VVNSKKR-KAPWNXXXXXXXXXXXXKPDPQQKKPRKSIDMTSVECFRCHQMGHYARAC 283
            ++     +   N            K + +Q K +K        CF C + GHYAR C
Sbjct: 221 AISKANHPRGKNNNNKKNSGNYMSPKKNQEQFKGKKG------PCFVCGKPGHYAREC 272