BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00020060
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
ref|XP_002526170.1| pentatricopeptide repeat-containing protein,...    74   1e-11
ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat...    72   6e-11
emb|CBI35204.3| unnamed protein product [Vitis vinifera]               72   6e-11
emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]    71   8e-11

>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
           gi|297735515|emb|CBI17955.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/90 (43%), Positives = 59/90 (65%)
 Frame = +3

Query: 3   INGFCQEGMLIDAQSLFIEMEENSVAPNDRTFNIMVQGFLKGRNFEKAVQFLKARDERRF 182
           I+G C+ G L +A+ LF+ MEE   APN  TFN +++GF +    +K V+ L+   E+ F
Sbjct: 525 IHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDF 584

Query: 183 SADANTMSMVINLLAKDEPNHESLDILRNF 272
           S DA+T+S+V++LL+KDE   E L +L  F
Sbjct: 585 SPDASTISIVVDLLSKDEKYREYLHLLPTF 614


>ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534547|gb|EEF36246.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/91 (38%), Positives = 60/91 (65%)
 Frame = +3

Query: 3   INGFCQEGMLIDAQSLFIEMEENSVAPNDRTFNIMVQGFLKGRNFEKAVQFLKARDERRF 182
           ING C+EG L++A+ LF++MEE+    ++ +FN +++GFL+    +KA++FLK   E+ F
Sbjct: 401 INGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNF 460

Query: 183 SADANTMSMVINLLAKDEPNHESLDILRNFL 275
           S + +   M++NL A D    +S ++  NFL
Sbjct: 461 SPNDSVTLMLVNLYAADA---QSSELPNNFL 488


>ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/91 (38%), Positives = 54/91 (59%)
 Frame = +3

Query: 3   INGFCQEGMLIDAQSLFIEMEENSVAPNDRTFNIMVQGFLKGRNFEKAVQFLKARDERRF 182
           ING C+ G+L +A  LF EM+EN    N   +N + +GFL+     +A+Q L+    R F
Sbjct: 488 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGF 547

Query: 183 SADANTMSMVINLLAKDEPNHESLDILRNFL 275
           SADA+TM++ + +L+ D  +     ILR F+
Sbjct: 548 SADASTMTLFVKMLSDDGLDQSLKQILREFV 578


>emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/90 (38%), Positives = 54/90 (60%)
 Frame = +3

Query: 3   INGFCQEGMLIDAQSLFIEMEENSVAPNDRTFNIMVQGFLKGRNFEKAVQFLKARDERRF 182
           ING C+ G+L +A  LF EM+EN    N   +N + +GFL+     +A+Q L+    R F
Sbjct: 421 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGF 480

Query: 183 SADANTMSMVINLLAKDEPNHESLDILRNF 272
           SADA+TM++ + +L+ D  +     ILR+F
Sbjct: 481 SADASTMTLFVKMLSDDGLDQSLKQILRDF 510


>emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/89 (39%), Positives = 53/89 (59%)
 Frame = +3

Query: 3   INGFCQEGMLIDAQSLFIEMEENSVAPNDRTFNIMVQGFLKGRNFEKAVQFLKARDERRF 182
           ING C+ G+L +A  LF EM+EN    N   +N + +GFL+     +A+Q L+    R F
Sbjct: 542 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGF 601

Query: 183 SADANTMSMVINLLAKDEPNHESLDILRN 269
           SADA+TM++ + +L+ D  +     ILRN
Sbjct: 602 SADASTMTLFVKMLSDDGLDQSLKQILRN 630