BLASTX nr result

ID: Coptis21_contig00019979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019979
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523203.1| PREDICTED: cyclin-dependent kinase E-1-like ...    75   5e-12
ref|XP_003602688.1| Cyclin-dependent kinase E-1 [Medicago trunca...    75   5e-12
ref|XP_004172297.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-depen...    75   7e-12
ref|XP_004144669.1| PREDICTED: cyclin-dependent kinase E-1-like ...    74   1e-11
ref|XP_002273171.1| PREDICTED: cyclin-dependent kinase E-1 [Viti...    74   1e-11

>ref|XP_003523203.1| PREDICTED: cyclin-dependent kinase E-1-like [Glycine max]
          Length = 462

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 38/43 (88%), Positives = 39/43 (90%), Gaps = 2/43 (4%)
 Frame = -2

Query: 125 PVWLQQYDLIGKIGEGTYGLVFLAKIKS--QRGKSIAIKKFKQ 3
           P WLQQYDLIGKIGEGTYGLVFLA+IKS   RGKSIAIKKFKQ
Sbjct: 12  PEWLQQYDLIGKIGEGTYGLVFLARIKSSTNRGKSIAIKKFKQ 54


>ref|XP_003602688.1| Cyclin-dependent kinase E-1 [Medicago truncatula]
           gi|355491736|gb|AES72939.1| Cyclin-dependent kinase E-1
           [Medicago truncatula]
          Length = 474

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 38/43 (88%), Positives = 39/43 (90%), Gaps = 2/43 (4%)
 Frame = -2

Query: 125 PVWLQQYDLIGKIGEGTYGLVFLAKIKS--QRGKSIAIKKFKQ 3
           P WLQQYDLIGKIGEGTYGLVFLA+IKS   RGKSIAIKKFKQ
Sbjct: 12  PEWLQQYDLIGKIGEGTYGLVFLARIKSTTNRGKSIAIKKFKQ 54


>ref|XP_004172297.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-dependent kinase E-1-like,
           partial [Cucumis sativus]
          Length = 330

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/44 (86%), Positives = 39/44 (88%), Gaps = 3/44 (6%)
 Frame = -2

Query: 125 PVWLQQYDLIGKIGEGTYGLVFLAKIKS---QRGKSIAIKKFKQ 3
           P WLQQYDLIGKIGEGTYGLVFLAKIK+    RGKSIAIKKFKQ
Sbjct: 32  PEWLQQYDLIGKIGEGTYGLVFLAKIKTPSPSRGKSIAIKKFKQ 75


>ref|XP_004144669.1| PREDICTED: cyclin-dependent kinase E-1-like [Cucumis sativus]
          Length = 484

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 38/44 (86%), Positives = 38/44 (86%), Gaps = 3/44 (6%)
 Frame = -2

Query: 125 PVWLQQYDLIGKIGEGTYGLVFLAKIK---SQRGKSIAIKKFKQ 3
           P WLQQYDLIGKIGEGTYGLVFLAKIK     RGKSIAIKKFKQ
Sbjct: 32  PEWLQQYDLIGKIGEGTYGLVFLAKIKPPSPSRGKSIAIKKFKQ 75


>ref|XP_002273171.1| PREDICTED: cyclin-dependent kinase E-1 [Vitis vinifera]
           gi|296082615|emb|CBI21620.3| unnamed protein product
           [Vitis vinifera]
          Length = 481

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/43 (86%), Positives = 38/43 (88%), Gaps = 2/43 (4%)
 Frame = -2

Query: 125 PVWLQQYDLIGKIGEGTYGLVFLAKIK--SQRGKSIAIKKFKQ 3
           P WLQQYDLIGKIGEGTYGLVFLA+ K  S RGKSIAIKKFKQ
Sbjct: 24  PAWLQQYDLIGKIGEGTYGLVFLARTKSPSNRGKSIAIKKFKQ 66


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