BLASTX nr result

ID: Coptis21_contig00019960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019960
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-07
ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-07

>ref|XP_002310987.1| predicted protein [Populus trichocarpa] gi|222850807|gb|EEE88354.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
 Frame = +1

Query: 382 LDDYILAEIISKLPI-KHMIGCQSVSRLWHHVISSICIPKIT-SSPVYGLIFNTCIPFPK 555
           L D +L EI+ ++   KH+I  +SV + W+++I+  C+PKI+ SSP++G I+       K
Sbjct: 25  LPDDVLVEILCRVTDRKHLIRLKSVCKSWNNLITDACVPKISASSPLHGFIYLA----KK 80

Query: 556 CKMGTWSFACINAFSEKVGSPNTSLVESCLGRRLPFDPSPNSLLDCCNGMLLFFD 720
              G      I        +P            LPF+P+    LDCCNG+LLF +
Sbjct: 81  IGFGKPYIDYIPCAITPAVAPEPHEFVKSYSSLLPFEPARGDFLDCCNGLLLFVE 135


>ref|XP_002333768.1| predicted protein [Populus trichocarpa] gi|222838455|gb|EEE76820.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
 Frame = +1

Query: 382 LDDYILAEIISKLPI-KHMIGCQSVSRLWHHVISSICIPKIT-SSPVYGLIFN------- 534
           L D +L EI+ ++   KH+I  +SV + W+++I+  C+PKI+ SSP++G I++       
Sbjct: 25  LPDDVLVEILCRVTDGKHLIRLKSVCKCWNNLITDACVPKISASSPLHGFIYHALRVSSR 84

Query: 535 -TCIPFPKCKMGTWSFACINAFSEKVGSPNTSLVESCLGRRLPFDPSPNSLLDCCNGMLL 711
            T I +  C           A +  V       V+S     LPFD +    LDCCNG+LL
Sbjct: 85  KTYIDYIPC-----------AMTPAVAPEPHEFVKS-YSSLLPFDLARGDFLDCCNGLLL 132

Query: 712 FFD 720
           F +
Sbjct: 133 FVE 135


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