BLASTX nr result

ID: Coptis21_contig00019943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019943
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA88222.1| myb-related transcription factor LBM2 [Nicotiana...   270   3e-70
gb|AAB41101.1| transcription factor Myb1 [Nicotiana tabacum] gi|...   268   1e-69
dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana...   268   2e-69
emb|CAA78387.1| protein 2 [Petunia x hybrida]                         268   2e-69
ref|XP_002281274.1| PREDICTED: myb-related protein Myb4 [Vitis v...   266   8e-69

>dbj|BAA88222.1| myb-related transcription factor LBM2 [Nicotiana tabacum]
          Length = 277

 Score =  270 bits (691), Expect = 3e-70
 Identities = 144/277 (51%), Positives = 185/277 (66%), Gaps = 10/277 (3%)
 Frame = +3

Query: 3   PCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPD 182
           PCCEKMGLK+GPW+PEED +LI++I +NGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPD
Sbjct: 5   PCCEKMGLKKGPWTPEEDQILISFIQQNGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPD 64

Query: 183 IKRGNFTREEEDSIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLKPSEVSPD 362
           IKRGNFT+EEED+II LHEMLGNRWS IAA+LPGRTDNEIKNVWHTHLKK+LK  +   +
Sbjct: 65  IKRGNFTKEEEDTIIQLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLKDYKPPQN 124

Query: 363 ANLHLIKSEANMGNESKSASGSESITFSSPQRFENXXXXXXXXXXXXXXXXXGTE-SAIT 539
              H  K+  + G  +  +S +  +TF   Q+                     TE S +T
Sbjct: 125 PKRH-SKNHDSKGPTTSESSNNSHLTFIYTQK---HIIDSSVPAPNSPQISSSTEMSTVT 180

Query: 540 -GENTKISIKEECTNSWETLPHTDESLWSNVMSME-HFSTMEE--FSTIDINSEVQLPLS 707
             ++ ++ IK+E   S E  P  DES W++ +S + ++S   +    T D   +VQLP S
Sbjct: 181 LVDDHQMVIKQEEMESSEYFPEIDESFWTDKLSTDNNWSNTHDHVMVTADQELQVQLPFS 240

Query: 708 SVSSQ-----TSAIEYGDEFWYNLFTKTEALSDLPEF 803
           S+  +     T+ +E   +FWYN+F KT+ L +LPEF
Sbjct: 241 SLKEENVDMLTTKMEDDMDFWYNVFIKTDDLPELPEF 277


>gb|AAB41101.1| transcription factor Myb1 [Nicotiana tabacum]
           gi|6552363|dbj|BAA88223.1| myb-related transcription
           factor LBM3 [Nicotiana tabacum]
          Length = 278

 Score =  268 bits (686), Expect = 1e-69
 Identities = 136/275 (49%), Positives = 179/275 (65%), Gaps = 8/275 (2%)
 Frame = +3

Query: 3   PCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPD 182
           PCCEKMGLK+GPW PEED +LI++I  NGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPD
Sbjct: 5   PCCEKMGLKKGPWIPEEDQILISFIQTNGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPD 64

Query: 183 IKRGNFTREEEDSIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLKPSEVSPD 362
           IKRGNFT+EEE++II LHEMLGNRWS IAA+LPGRTDNEIKNVWHTHLKK+LK  +   +
Sbjct: 65  IKRGNFTKEEEETIIQLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLKDYKPPQN 124

Query: 363 ANLH-LIKSEANMGNESKSASGSESITFSSPQRFENXXXXXXXXXXXXXXXXXGTESAIT 539
           +  H   K+  + G  +  +S +  +T  + Q+  +                  T + + 
Sbjct: 125 SKRHSKSKNHDSKGPTTSESSNNSDLTIINTQKHIDSPVLAPNSPQISSSTEMSTVT-LV 183

Query: 540 GENTKISIKEECTNSWETLPHTDESLWSNVMSMEHFSTMEEFSTIDINSE--VQLPLSSV 713
            ++  + IK+E   S E  P  DES W++ ++ ++  +  +   +  N E  VQLP SS 
Sbjct: 184 DDHQMVVIKQEVMESSEYFPEIDESFWTDELTTDNNWSSTDHVMVAANQELQVQLPFSSF 243

Query: 714 SSQ-----TSAIEYGDEFWYNLFTKTEALSDLPEF 803
             +      + +E   +FWYN+F KT+ L +LPEF
Sbjct: 244 KEENVDILATKMEDDMDFWYNVFIKTDDLPELPEF 278


>dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana tabacum]
          Length = 281

 Score =  268 bits (685), Expect = 2e-69
 Identities = 146/285 (51%), Positives = 177/285 (62%), Gaps = 18/285 (6%)
 Frame = +3

Query: 3   PCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPD 182
           PCCEKMGLK+GPW+PEED +L++YI  NGHGNWRALPK AGLLRCGKSCRLRWTNYLRPD
Sbjct: 5   PCCEKMGLKKGPWTPEEDQVLVSYIQTNGHGNWRALPKLAGLLRCGKSCRLRWTNYLRPD 64

Query: 183 IKRGNFTREEEDSIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLKPSEVSPD 362
           IKRGNFTREEEDSII LHEMLGNRWS IAARLPGRTDNEIKNVWHTHLKKRLK     P 
Sbjct: 65  IKRGNFTREEEDSIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLK--NYQPP 122

Query: 363 ANLHLIKSEANMGNESKSASGSESITFSSPQRFENXXXXXXXXXXXXXXXXXGTE--SAI 536
            N     S+ +  N   S + S S TF++   F N                  +   S +
Sbjct: 123 QN-----SKKHSKNNLDSKAPSTSQTFNNSDNFSNIQEDINGPVTGPNSPQRSSSEMSTV 177

Query: 537 TGENTKISI-----------KEECTNSWETLPHTDESLWSNVMSMEHFSTMEEFSTIDIN 683
           T ++T ++             +E  +S   +P  DES W+N +S    S  +   T +  
Sbjct: 178 TADSTAMTTITIDDQNMFKQLDEMNSSESFIPEIDESFWTNDLSTGDNSNFDMEGTGE-E 236

Query: 684 SEVQLPLSSVSSQT-----SAIEYGDEFWYNLFTKTEALSDLPEF 803
            +VQ P SSV  ++     + +E   +FWYN+F K+  L DLPEF
Sbjct: 237 LQVQFPFSSVKQESMDMVGTKLEDDMDFWYNVFIKSGDLLDLPEF 281


>emb|CAA78387.1| protein 2 [Petunia x hybrida]
          Length = 280

 Score =  268 bits (685), Expect = 2e-69
 Identities = 144/279 (51%), Positives = 171/279 (61%), Gaps = 12/279 (4%)
 Frame = +3

Query: 3   PCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPD 182
           PCCEKMGLK+GPW+PEED +L++YI KNGHGNWRALPK AGLLRCGKSCRLRWTNYLRPD
Sbjct: 5   PCCEKMGLKKGPWTPEEDQILVSYIEKNGHGNWRALPKLAGLLRCGKSCRLRWTNYLRPD 64

Query: 183 IKRGNFTREEEDSIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLKPSEVSPD 362
           IKRGNFTREEED+II LHEMLGNRWS IAARLPGRTDNEIKNVWHTHLKKRLK  +   +
Sbjct: 65  IKRGNFTREEEDTIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQPPQN 124

Query: 363 ANLHLIKS-EANMGNESKSASGSESIT-----FSSPQRFENXXXXXXXXXXXXXXXXXGT 524
           +  H   + ++   + SK    SES +      + P    N                   
Sbjct: 125 SKRHSKNNHDSKAPSTSKMLDNSESFSTIQENINEPMTGPNSPQRSSSESSTVTADSLAA 184

Query: 525 ESAITGENTKISIKEECTNSWETLPHTDESLWSNVMSMEHFSTMEEFSTIDINSEVQLPL 704
                 + T   IK E  +S+E  P  DES W+  +SM     + +       S+VQ P 
Sbjct: 185 TDVTNDDQT--FIKHEEMDSYENFPEIDESFWTEDLSMGDNLDL-DMEVAGEKSQVQFPY 241

Query: 705 S------SVSSQTSAIEYGDEFWYNLFTKTEALSDLPEF 803
           S      SV    + +E   +FWYN+F K E L DLPEF
Sbjct: 242 SHDMKEQSVDMVGAKLEDDMDFWYNVFIKAEDLLDLPEF 280


>ref|XP_002281274.1| PREDICTED: myb-related protein Myb4 [Vitis vinifera]
          Length = 267

 Score =  266 bits (679), Expect = 8e-69
 Identities = 137/272 (50%), Positives = 178/272 (65%), Gaps = 8/272 (2%)
 Frame = +3

Query: 3   PCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNYLRPD 182
           PCC+KMGLK+GPW+PEED +L+A++ K+GHGNWRALPKQAGLLRCGKSCRLRW NYLRPD
Sbjct: 5   PCCDKMGLKKGPWTPEEDKILVAHVQKHGHGNWRALPKQAGLLRCGKSCRLRWVNYLRPD 64

Query: 183 IKRGNFTREEEDSIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLKPSEVSPD 362
           IKRGNF+REEED+II+LHE LGNRWS IAARLPGRTDNEIKNVWHT+LKKRLK    +P+
Sbjct: 65  IKRGNFSREEEDAIIDLHEKLGNRWSAIAARLPGRTDNEIKNVWHTNLKKRLKKKLATPN 124

Query: 363 ANLHLIKSEANMGNESKSASGSESITFSSPQRFENXXXXXXXXXXXXXXXXXGTESAITG 542
           +  H   + A    +S SA  SE +  + P +                     T+S I  
Sbjct: 125 SKGH--STAAASKCDSGSACQSEPVNLNFPGKISPQPSSSEFSSI--------TDSPIRN 174

Query: 543 ENTKIS--IKEECTNSWETLPHTDESLWSNVMSMEHFSTMEEFSTIDINSEVQLPLSSVS 716
               ++  IK+E  +S E+ P   ES WS+ +S ++ S    F T++  S++Q PLS   
Sbjct: 175 MEIHMNTGIKDEQMDSLESFPEIHESFWSDALSSDNSSMPTAFHTVNDESQLQFPLSPAD 234

Query: 717 S------QTSAIEYGDEFWYNLFTKTEALSDL 794
           +       +S I+ G EFWY++F +   L +L
Sbjct: 235 ALEVGYGHSSRIDDGMEFWYDVFIRAGGLQEL 266


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