BLASTX nr result

ID: Coptis21_contig00019909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019909
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266599.2| PREDICTED: uncharacterized protein LOC100255...   229   3e-58
emb|CBI32095.3| unnamed protein product [Vitis vinifera]              229   3e-58
ref|XP_002534526.1| conserved hypothetical protein [Ricinus comm...   225   3e-57
ref|XP_002311587.1| predicted protein [Populus trichocarpa] gi|2...   221   5e-56
gb|ABK93096.1| unknown [Populus trichocarpa]                          221   7e-56

>ref|XP_002266599.2| PREDICTED: uncharacterized protein LOC100255243 [Vitis vinifera]
          Length = 453

 Score =  229 bits (583), Expect = 3e-58
 Identities = 106/150 (70%), Positives = 126/150 (84%)
 Frame = +3

Query: 123 KPVVFPSVLQPRVVVYDGVCHLCHSGVKWVINADKHDKIKFCCLQSRAAEPYLRACGLDR 302
           KP++ P++LQPRVVVYDGVCHLCH GVK VI ADKH KIKFCCLQS+AAEPYLR CGLDR
Sbjct: 300 KPLI-PTLLQPRVVVYDGVCHLCHQGVKRVIAADKHRKIKFCCLQSKAAEPYLRVCGLDR 358

Query: 303 EDVLRRFLFVEGPGVYHQASTAALKVXXXXXXXXXXXXXXXIVPTPLRDAVYDYVAENRY 482
           EDVLRRFLF+EGPG+YHQASTAAL+V               I+PTPLRDA+YDYVA+ RY
Sbjct: 359 EDVLRRFLFIEGPGLYHQASTAALRVLSYLPLPYSALSTLLIIPTPLRDAIYDYVAKRRY 418

Query: 483 KWFGKDDDCIILQEMEMLERFIDREEIVEK 572
            WFGK++DC++L+E EMLERFIDREE++++
Sbjct: 419 DWFGKEEDCLVLKEKEMLERFIDREEMLDQ 448


>emb|CBI32095.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score =  229 bits (583), Expect = 3e-58
 Identities = 106/150 (70%), Positives = 126/150 (84%)
 Frame = +3

Query: 123 KPVVFPSVLQPRVVVYDGVCHLCHSGVKWVINADKHDKIKFCCLQSRAAEPYLRACGLDR 302
           KP++ P++LQPRVVVYDGVCHLCH GVK VI ADKH KIKFCCLQS+AAEPYLR CGLDR
Sbjct: 63  KPLI-PTLLQPRVVVYDGVCHLCHQGVKRVIAADKHRKIKFCCLQSKAAEPYLRVCGLDR 121

Query: 303 EDVLRRFLFVEGPGVYHQASTAALKVXXXXXXXXXXXXXXXIVPTPLRDAVYDYVAENRY 482
           EDVLRRFLF+EGPG+YHQASTAAL+V               I+PTPLRDA+YDYVA+ RY
Sbjct: 122 EDVLRRFLFIEGPGLYHQASTAALRVLSYLPLPYSALSTLLIIPTPLRDAIYDYVAKRRY 181

Query: 483 KWFGKDDDCIILQEMEMLERFIDREEIVEK 572
            WFGK++DC++L+E EMLERFIDREE++++
Sbjct: 182 DWFGKEEDCLVLKEKEMLERFIDREEMLDQ 211


>ref|XP_002534526.1| conserved hypothetical protein [Ricinus communis]
           gi|223525107|gb|EEF27856.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 213

 Score =  225 bits (574), Expect = 3e-57
 Identities = 103/147 (70%), Positives = 120/147 (81%)
 Frame = +3

Query: 126 PVVFPSVLQPRVVVYDGVCHLCHSGVKWVINADKHDKIKFCCLQSRAAEPYLRACGLDRE 305
           PV  P++LQPRVVVYDGVCHLCH GVKWVI ADK+ KIKFCCLQS+AAEPYLR CGLDR+
Sbjct: 66  PVTLPTLLQPRVVVYDGVCHLCHRGVKWVIKADKYRKIKFCCLQSKAAEPYLRLCGLDRD 125

Query: 306 DVLRRFLFVEGPGVYHQASTAALKVXXXXXXXXXXXXXXXIVPTPLRDAVYDYVAENRYK 485
           DVLRRFLF+EGP +YHQASTAAL+V               I+PTPLRDAVYDYVA+ RY 
Sbjct: 126 DVLRRFLFIEGPDLYHQASTAALRVVSYLPLPYSALSTLLIIPTPLRDAVYDYVAKGRYN 185

Query: 486 WFGKDDDCIILQEMEMLERFIDREEIV 566
           WFGK DDC++L++ E+LERFIDR E++
Sbjct: 186 WFGKADDCLVLKDKELLERFIDRGEMM 212


>ref|XP_002311587.1| predicted protein [Populus trichocarpa] gi|222851407|gb|EEE88954.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  221 bits (564), Expect = 5e-56
 Identities = 104/149 (69%), Positives = 121/149 (81%), Gaps = 1/149 (0%)
 Frame = +3

Query: 123 KPVV-FPSVLQPRVVVYDGVCHLCHSGVKWVINADKHDKIKFCCLQSRAAEPYLRACGLD 299
           KPV   P++LQPRVVVYD VCHLCH GVKWVI ADK+ KIKFCCLQS+AAEPYL  CGL+
Sbjct: 60  KPVATLPTLLQPRVVVYDAVCHLCHRGVKWVIEADKYGKIKFCCLQSKAAEPYLALCGLN 119

Query: 300 REDVLRRFLFVEGPGVYHQASTAALKVXXXXXXXXXXXXXXXIVPTPLRDAVYDYVAENR 479
           REDVLRRFLF+EGPG YHQASTAAL+V               IVPTP+RDAVYDYVA++R
Sbjct: 120 REDVLRRFLFIEGPGSYHQASTAALRVMSYLPQPYSALSTLLIVPTPIRDAVYDYVAKHR 179

Query: 480 YKWFGKDDDCIILQEMEMLERFIDREEIV 566
           Y WFGK D+C++L+E E+LERFIDR+EI+
Sbjct: 180 YGWFGKADECLVLKEKELLERFIDRDEII 208


>gb|ABK93096.1| unknown [Populus trichocarpa]
          Length = 220

 Score =  221 bits (563), Expect = 7e-56
 Identities = 103/149 (69%), Positives = 121/149 (81%), Gaps = 1/149 (0%)
 Frame = +3

Query: 123 KPVV-FPSVLQPRVVVYDGVCHLCHSGVKWVINADKHDKIKFCCLQSRAAEPYLRACGLD 299
           KPV   P++LQPRVVVYD VCHLCH GVKWVI ADK+ KIKFCCLQS+AAEPYL  CGL+
Sbjct: 65  KPVATLPTLLQPRVVVYDAVCHLCHRGVKWVIEADKYGKIKFCCLQSKAAEPYLALCGLN 124

Query: 300 REDVLRRFLFVEGPGVYHQASTAALKVXXXXXXXXXXXXXXXIVPTPLRDAVYDYVAENR 479
           REDVLRRFLF+EGPG YHQASTAAL+V               I+PTP+RDAVYDYVA++R
Sbjct: 125 REDVLRRFLFIEGPGSYHQASTAALRVMSYLPQPYSAPSTLLIIPTPIRDAVYDYVAKHR 184

Query: 480 YKWFGKDDDCIILQEMEMLERFIDREEIV 566
           Y WFGK D+C++L+E E+LERFIDR+EI+
Sbjct: 185 YGWFGKADECLVLKEKELLERFIDRDEII 213


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