BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019897
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   146   1e-33
emb|CBI19766.3| unnamed protein product [Vitis vinifera]              146   1e-33
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28

>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/101 (67%), Positives = 85/101 (84%)
 Frame = -3

Query: 306 SITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFE 127
           S+TMLSILPACANLVA KKVKEIHGC+LR  L  E SVAN LID YAKSGNI+YA+ +F+
Sbjct: 528 SVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQ 587

Query: 126 HLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPN 4
            + S+D+ISWN+L+AGYVLHGC + AL++F+QM  +G KP+
Sbjct: 588 GISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPS 628



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/100 (36%), Positives = 58/100 (58%)
 Frame = -3

Query: 303 ITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFEH 124
           +T+ S + ACA+L A KK  E+H   ++     +  V N+LID Y+KSG +  AR VF+ 
Sbjct: 357 VTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDM 416

Query: 123 LPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPN 4
           +  +DV +WN+++ GY   G   +A ++F +M      PN
Sbjct: 417 ILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPN 456



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/94 (35%), Positives = 53/94 (56%)
 Frame = -3

Query: 288 ILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFEHLPSRD 109
           IL AC N    +  K IH  V+R  +     V+N+++  YAK G +  AR  FE++  RD
Sbjct: 191 ILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRD 250

Query: 108 VISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKP 7
            +SWN+++ GY   G   ++  +FE+M+  G +P
Sbjct: 251 RVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEP 284


>emb|CBI19766.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  146 bits (369), Expect = 1e-33
 Identities = 68/101 (67%), Positives = 85/101 (84%)
 Frame = -3

Query: 306 SITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFE 127
           S+TMLSILPACANLVA KKVKEIHGC+LR  L  E SVAN LID YAKSGNI+YA+ +F+
Sbjct: 182 SVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQ 241

Query: 126 HLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPN 4
            + S+D+ISWN+L+AGYVLHGC + AL++F+QM  +G KP+
Sbjct: 242 GISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPS 282



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/100 (36%), Positives = 58/100 (58%)
 Frame = -3

Query: 303 ITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFEH 124
           +T+ S + ACA+L A KK  E+H   ++     +  V N+LID Y+KSG +  AR VF+ 
Sbjct: 11  VTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDM 70

Query: 123 LPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPN 4
           +  +DV +WN+++ GY   G   +A ++F +M      PN
Sbjct: 71  ILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPN 110


>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/101 (61%), Positives = 84/101 (83%)
 Frame = -3

Query: 306 SITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFE 127
           S+T+LSILPACAN++A KK+KEIHGCVLR  L+ E +VAN+L+D YAKSGNI Y+R VF 
Sbjct: 523 SVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFN 582

Query: 126 HLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPN 4
            + S+D+I+WN+++AGY+LHGC + A  +F+QMR LG +PN
Sbjct: 583 GMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPN 623



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/101 (35%), Positives = 58/101 (57%)
 Frame = -3

Query: 306 SITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFE 127
           +IT+ S   ACA+L + +   EIH   ++  +  ET V N+LID Y+K G +  AR VF+
Sbjct: 351 TITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFD 410

Query: 126 HLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPN 4
            +  +DV +WN+++ GY   G   +A  +F ++R     PN
Sbjct: 411 TILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPN 451



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/94 (36%), Positives = 51/94 (54%)
 Frame = -3

Query: 288 ILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFEHLPSRD 109
           IL AC N    + VK IH  V+R  L     ++N+++ A+ K G +  AR  F ++  RD
Sbjct: 186 ILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERD 245

Query: 108 VISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKP 7
            +SWN ++AGY   G  +EA  + + M   G KP
Sbjct: 246 GVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKP 279


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 1463

 Score =  140 bits (354), Expect = 8e-32
 Identities = 62/101 (61%), Positives = 84/101 (83%)
 Frame = -3

Query: 306 SITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFE 127
           S+T+LSILPACAN++A KK+KEIHGCVLR  L+ E +VAN+L+D YAKSGNI Y+R VF 
Sbjct: 523 SVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFN 582

Query: 126 HLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPN 4
            + S+D+I+WN+++AGY+LHGC + A  +F+QMR LG +PN
Sbjct: 583 GMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPN 623



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/101 (35%), Positives = 58/101 (57%)
 Frame = -3

Query: 306 SITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFE 127
           +IT+ S   ACA+L + +   EIH   ++  +  ET V N+LID Y+K G +  AR VF+
Sbjct: 351 TITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFD 410

Query: 126 HLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPN 4
            +  +DV +WN+++ GY   G   +A  +F ++R     PN
Sbjct: 411 TILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPN 451



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/94 (36%), Positives = 51/94 (54%)
 Frame = -3

Query: 288 ILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFEHLPSRD 109
           IL AC N    + VK IH  V+R  L     ++N+++ A+ K G +  AR  F ++  RD
Sbjct: 186 ILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERD 245

Query: 108 VISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKP 7
            +SWN ++AGY   G  +EA  + + M   G KP
Sbjct: 246 GVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKP 279


>ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Glycine max]
          Length = 945

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/100 (61%), Positives = 78/100 (78%)
 Frame = -3

Query: 303 ITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFEH 124
           +T+L+ILPAC NLVA KKVKEIH C  R  L  E SV+NT ID+YAKSGNI+Y+R VF+ 
Sbjct: 528 VTVLTILPACTNLVAAKKVKEIHCCATRRNLVSELSVSNTFIDSYAKSGNIMYSRKVFDG 587

Query: 123 LPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPN 4
           L  +D+ISWN+L++GYVLHGC   AL++F+QMR  G  P+
Sbjct: 588 LSPKDIISWNSLLSGYVLHGCSESALDLFDQMRKDGLHPS 627



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/101 (33%), Positives = 57/101 (56%)
 Frame = -3

Query: 306 SITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFE 127
           SIT+ S   ACA++ +     EIH   ++  +  +  + N+LID YAK G++  A+ +F+
Sbjct: 355 SITIASAASACASVKSLSMGSEIHSIAVKTSMVDDILIGNSLIDMYAKGGDLEAAQSIFD 414

Query: 126 HLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPN 4
            +  RDV SWN+++ GY   G   +A  +F +M+     PN
Sbjct: 415 VMLERDVYSWNSIIGGYCQAGFCGKAHELFMKMQESDSPPN 455



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/94 (29%), Positives = 47/94 (50%)
 Frame = -3

Query: 288 ILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFEHLPSRD 109
           +L AC      +  + IH  V+RG +     V N+++  YAK G +  A  +F  +  R+
Sbjct: 190 VLKACGKFRDIETGRLIHSLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKIFRRMDERN 249

Query: 108 VISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKP 7
            +SWN ++ GY   G   +A   F+ M+  G +P
Sbjct: 250 CVSWNVIITGYCQRGEIEQAQKYFDAMQEEGMEP 283