BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019863
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_002531596.1| pentatricopeptide repeat-containing protein,...    95   5e-18
emb|CBI21840.3| unnamed protein product [Vitis vinifera]               93   2e-17

>ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 461

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/86 (56%), Positives = 66/86 (76%)
 Frame = -3

Query: 259 PVLDQWLKEGRNVSKDDLIYIINTLRPYKRFRHALEISQWMTEQSYIPLSAVDVAGRLDL 80
           P+LDQW+ EGR V +D+L +II  LR YKRF+HALEIS+WM+++ Y PLS  D+A R++L
Sbjct: 47  PLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNL 106

Query: 79  IAKVHGLELAEKYFDTISMQLKKFPV 2
           I +VHGLE  E YFD +  QLK++ V
Sbjct: 107 ILRVHGLEQVEDYFDNMPSQLKRYQV 132


>ref|XP_004146598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 227

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/86 (56%), Positives = 66/86 (76%)
 Frame = -3

Query: 259 PVLDQWLKEGRNVSKDDLIYIINTLRPYKRFRHALEISQWMTEQSYIPLSAVDVAGRLDL 80
           P+LDQW+ EGR V +D+L +II  LR YKRF+HALEIS+WM+++ Y PLS  D+A R++L
Sbjct: 47  PLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNL 106

Query: 79  IAKVHGLELAEKYFDTISMQLKKFPV 2
           I +VHGLE  E YFD +  QLK++ V
Sbjct: 107 ILRVHGLEQVEDYFDNMPSQLKRYQV 132


>ref|XP_004137019.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
           gi|449479168|ref|XP_004155524.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 500

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/82 (53%), Positives = 63/82 (76%)
 Frame = -3

Query: 259 PVLDQWLKEGRNVSKDDLIYIINTLRPYKRFRHALEISQWMTEQSYIPLSAVDVAGRLDL 80
           PVL++W+ +GR + K +L Y+++ ++  +RF HALEISQWMT++ Y+ LS  D A RLDL
Sbjct: 54  PVLEKWVGDGRAIGKPELQYLVHLMKDSRRFNHALEISQWMTDRRYLSLSPSDAAVRLDL 113

Query: 79  IAKVHGLELAEKYFDTISMQLK 14
           I  VHGLE AE YF++IS++LK
Sbjct: 114 IHSVHGLEHAENYFNSISIRLK 135


>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 300

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/86 (52%), Positives = 63/86 (73%)
 Frame = -3

Query: 259 PVLDQWLKEGRNVSKDDLIYIINTLRPYKRFRHALEISQWMTEQSYIPLSAVDVAGRLDL 80
           P+LDQW++EG++V+KD L   I  LR  KR+ HALEIS WM+++ Y  L++ DVA RLDL
Sbjct: 67  PILDQWIEEGKSVNKDQLQVFIKELRYCKRYTHALEISMWMSDKRYFALTSRDVAIRLDL 126

Query: 79  IAKVHGLELAEKYFDTISMQLKKFPV 2
           ++KV G+E AEKYF+ +  +LK   V
Sbjct: 127 MSKVLGIEQAEKYFENVPQKLKVLEV 152


>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/86 (51%), Positives = 60/86 (69%)
 Frame = -3

Query: 259 PVLDQWLKEGRNVSKDDLIYIINTLRPYKRFRHALEISQWMTEQSYIPLSAVDVAGRLDL 80
           P L+QW KEGR++ + DL  +I  LR +KR+ HALEI +W+ ++ Y  +S  DVA +LDL
Sbjct: 53  PALEQWRKEGRSIKQQDLHRLIRKLRTFKRYNHALEIYEWIRDKFYFDISPGDVAIQLDL 112

Query: 79  IAKVHGLELAEKYFDTISMQLKKFPV 2
           I+KVHGLE AEKYF+     L+ F V
Sbjct: 113 ISKVHGLEQAEKYFNETPNSLRSFQV 138