BLASTX nr result

ID: Coptis21_contig00019749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019749
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278320.1| PREDICTED: PITH domain-containing protein At...   305   9e-81
ref|XP_002512222.1| conserved hypothetical protein [Ricinus comm...   299   6e-79
gb|AFK42155.1| unknown [Medicago truncatula]                          293   5e-77
ref|XP_002884470.1| hypothetical protein ARALYDRAFT_477747 [Arab...   290   2e-76
ref|XP_002319068.1| predicted protein [Populus trichocarpa] gi|2...   289   7e-76

>ref|XP_002278320.1| PREDICTED: PITH domain-containing protein At3g04780 [Vitis
           vinifera] gi|298204881|emb|CBI34188.3| unnamed protein
           product [Vitis vinifera]
          Length = 176

 Score =  305 bits (781), Expect = 9e-81
 Identities = 147/176 (83%), Positives = 163/176 (92%)
 Frame = -1

Query: 851 MSTESSSAIYRNQVDLLDFIDWTGVECLNQKPNHSIVNALKQGYREDEGLILESDADEQL 672
           MS ES++AI RNQ DLLDFIDWTGVECLNQ  + S+ NALKQGYRED+GL LESDADEQL
Sbjct: 1   MSAESATAIQRNQADLLDFIDWTGVECLNQSTSQSLANALKQGYREDDGLHLESDADEQL 60

Query: 671 LVYIPFTQVIKLHSVSIKGPEDEGAMTVKLFANKEHMGFSNVNDFPPSDTVVLSPDNLKG 492
           L+YIPFTQVIKLHS++IKGPE+EG  TVKLF+NKEHMGFSNVNDFPPSDTV LS DNLKG
Sbjct: 61  LIYIPFTQVIKLHSIAIKGPEEEGPKTVKLFSNKEHMGFSNVNDFPPSDTVALSSDNLKG 120

Query: 491 QPVLLKYVKFQNVRSLTLFIEDNQSGADITKVQKIVFYGSTVETTDMKGLKKIEDH 324
           +P++LKYVKFQNVRSLT+FIEDNQSG++ITKVQKIV YGSTVETTDMKGLKKIEDH
Sbjct: 121 KPIVLKYVKFQNVRSLTIFIEDNQSGSEITKVQKIVLYGSTVETTDMKGLKKIEDH 176


>ref|XP_002512222.1| conserved hypothetical protein [Ricinus communis]
           gi|223548183|gb|EEF49674.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 176

 Score =  299 bits (765), Expect = 6e-79
 Identities = 140/176 (79%), Positives = 163/176 (92%)
 Frame = -1

Query: 851 MSTESSSAIYRNQVDLLDFIDWTGVECLNQKPNHSIVNALKQGYREDEGLILESDADEQL 672
           MS ES++AI R+QVDL+DF+DW+GVECLNQ P+HS+ NALKQGYRED+GL LESDADEQL
Sbjct: 1   MSAESATAIQRSQVDLVDFVDWSGVECLNQNPSHSLSNALKQGYREDDGLNLESDADEQL 60

Query: 671 LVYIPFTQVIKLHSVSIKGPEDEGAMTVKLFANKEHMGFSNVNDFPPSDTVVLSPDNLKG 492
           L+YIPFTQVIKLHS+ IKGPE+EG  TVKLF+NKEHMGFSNVNDFPPSDTV+LSPD L+G
Sbjct: 61  LIYIPFTQVIKLHSIVIKGPEEEGPKTVKLFSNKEHMGFSNVNDFPPSDTVILSPDTLQG 120

Query: 491 QPVLLKYVKFQNVRSLTLFIEDNQSGADITKVQKIVFYGSTVETTDMKGLKKIEDH 324
           +PV+LKYVKFQNVRSLT+FIEDN +G+DITKVQK   +G+TVETTDMKGLKK+EDH
Sbjct: 121 KPVVLKYVKFQNVRSLTIFIEDNHTGSDITKVQKFALFGTTVETTDMKGLKKVEDH 176


>gb|AFK42155.1| unknown [Medicago truncatula]
          Length = 177

 Score =  293 bits (749), Expect = 5e-77
 Identities = 143/177 (80%), Positives = 165/177 (93%), Gaps = 1/177 (0%)
 Frame = -1

Query: 851 MSTESSS-AIYRNQVDLLDFIDWTGVECLNQKPNHSIVNALKQGYREDEGLILESDADEQ 675
           MS ES++ A+++ QVDLLDFIDWTGVECLNQK N+S+ NA+KQGYRED+GL LESDADEQ
Sbjct: 1   MSGESATTAVHKGQVDLLDFIDWTGVECLNQKTNNSLPNAIKQGYREDDGLHLESDADEQ 60

Query: 674 LLVYIPFTQVIKLHSVSIKGPEDEGAMTVKLFANKEHMGFSNVNDFPPSDTVVLSPDNLK 495
           LL+YIPFTQVIKL+SV+ KGPEDEG  TVKLF+NKEHMGFSNVND+PPSDT+VLSP+NLK
Sbjct: 61  LLLYIPFTQVIKLYSVAFKGPEDEGPKTVKLFSNKEHMGFSNVNDYPPSDTLVLSPENLK 120

Query: 494 GQPVLLKYVKFQNVRSLTLFIEDNQSGADITKVQKIVFYGSTVETTDMKGLKKIEDH 324
           G+PVLLKYVKFQNVRSLT+FIEDNQ+ ++ITKVQKI+  GSTVETTDMKGLKKIEDH
Sbjct: 121 GKPVLLKYVKFQNVRSLTIFIEDNQTDSEITKVQKIMLIGSTVETTDMKGLKKIEDH 177


>ref|XP_002884470.1| hypothetical protein ARALYDRAFT_477747 [Arabidopsis lyrata subsp.
           lyrata] gi|297330310|gb|EFH60729.1| hypothetical protein
           ARALYDRAFT_477747 [Arabidopsis lyrata subsp. lyrata]
          Length = 176

 Score =  290 bits (743), Expect = 2e-76
 Identities = 141/176 (80%), Positives = 157/176 (89%)
 Frame = -1

Query: 851 MSTESSSAIYRNQVDLLDFIDWTGVECLNQKPNHSIVNALKQGYREDEGLILESDADEQL 672
           MS ES+S I + QVDLLDFIDW+GVECLNQ  NHS+ NALKQGYREDEGL LESDADEQL
Sbjct: 1   MSAESASQIPKGQVDLLDFIDWSGVECLNQSSNHSLPNALKQGYREDEGLNLESDADEQL 60

Query: 671 LVYIPFTQVIKLHSVSIKGPEDEGAMTVKLFANKEHMGFSNVNDFPPSDTVVLSPDNLKG 492
           L+YIPF QVIKLHS +IKGPE+EG  TVK F+NKEHM FSNVNDFPPSDT  L+ +NLKG
Sbjct: 61  LIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKG 120

Query: 491 QPVLLKYVKFQNVRSLTLFIEDNQSGADITKVQKIVFYGSTVETTDMKGLKKIEDH 324
           +PV+LKYVKFQNVRSLT+FIEDNQSG+++TKVQKI  YGSTVETTDMKGLKKIEDH
Sbjct: 121 KPVVLKYVKFQNVRSLTIFIEDNQSGSEVTKVQKIALYGSTVETTDMKGLKKIEDH 176


>ref|XP_002319068.1| predicted protein [Populus trichocarpa] gi|222857444|gb|EEE94991.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  289 bits (739), Expect = 7e-76
 Identities = 136/176 (77%), Positives = 161/176 (91%)
 Frame = -1

Query: 851 MSTESSSAIYRNQVDLLDFIDWTGVECLNQKPNHSIVNALKQGYREDEGLILESDADEQL 672
           M+ ES++AI R QVDLLDFID++GVECLNQ P+HS+ NA+KQGYRED+GL LESDADEQL
Sbjct: 1   MAAESATAIPRGQVDLLDFIDFSGVECLNQSPSHSLSNAIKQGYREDDGLNLESDADEQL 60

Query: 671 LVYIPFTQVIKLHSVSIKGPEDEGAMTVKLFANKEHMGFSNVNDFPPSDTVVLSPDNLKG 492
           L+Y+PF QV+KLHS++IKGPE+EG  TVKLF+NKEHMGFSNVND+PPSDT+VLSPD LKG
Sbjct: 61  LIYVPFNQVVKLHSIAIKGPEEEGPKTVKLFSNKEHMGFSNVNDYPPSDTIVLSPDTLKG 120

Query: 491 QPVLLKYVKFQNVRSLTLFIEDNQSGADITKVQKIVFYGSTVETTDMKGLKKIEDH 324
           +PV+LKYVKFQNVRSLT+FIEDNQS ++ITKV KI  +G+TVETTDMK LKKIEDH
Sbjct: 121 KPVVLKYVKFQNVRSLTIFIEDNQSDSEITKVHKIALFGTTVETTDMKSLKKIEDH 176


Top