BLASTX nr result

ID: Coptis21_contig00019670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019670
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago trunc...   172   3e-41
ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like...   170   1e-40
emb|CBI25868.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like...   169   2e-40
ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like...   160   8e-38

>ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago truncatula]
           gi|355512726|gb|AES94349.1| DNA repair endonuclease UVH1
           [Medicago truncatula]
          Length = 984

 Score =  172 bits (435), Expect = 3e-41
 Identities = 80/108 (74%), Positives = 97/108 (89%)
 Frame = -2

Query: 326 ILNAHHITDTCTESFIVRIFRSFNKNAYIRAFSDKPHSMVSGFAKTERIIKCLGLKKLHL 147
           ILNAH I++T TE+FIVRIFRSFN++AY+RAFSD+P +MVSGFAK ER +KCLGL+KLHL
Sbjct: 124 ILNAHSISETSTEAFIVRIFRSFNRDAYVRAFSDRPQAMVSGFAKAERTMKCLGLRKLHL 183

Query: 146 WPRFQVYVSQDLEKDPPVVVDIRVSLSVHMKGIQKAIIEAMDGCLKEI 3
           WPRFQVYVSQ+LE+DPP VVDIRV ++ +M GIQKAI+E MD CLKE+
Sbjct: 184 WPRFQVYVSQELERDPPDVVDIRVPMTKYMVGIQKAIVEVMDACLKEM 231


>ref|XP_002269337.2| PREDICTED: DNA repair endonuclease UVH1-like [Vitis vinifera]
          Length = 964

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/108 (72%), Positives = 96/108 (88%)
 Frame = -2

Query: 326 ILNAHHITDTCTESFIVRIFRSFNKNAYIRAFSDKPHSMVSGFAKTERIIKCLGLKKLHL 147
           ILNAH +++TCTE+FIVRI RS N  AY+RAFSDKPH+MVSGFAK ERI+KCL L++LHL
Sbjct: 123 ILNAHSLSETCTEAFIVRIIRSLNPAAYVRAFSDKPHAMVSGFAKAERIMKCLFLRRLHL 182

Query: 146 WPRFQVYVSQDLEKDPPVVVDIRVSLSVHMKGIQKAIIEAMDGCLKEI 3
           WPRFQV+VSQ+LE+ PPVVVDIRV ++ HM+GIQKAI+E +D CLKE+
Sbjct: 183 WPRFQVHVSQELERCPPVVVDIRVPMTAHMQGIQKAIVEVLDACLKEM 230


>emb|CBI25868.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/108 (72%), Positives = 96/108 (88%)
 Frame = -2

Query: 326 ILNAHHITDTCTESFIVRIFRSFNKNAYIRAFSDKPHSMVSGFAKTERIIKCLGLKKLHL 147
           ILNAH +++TCTE+FIVRI RS N  AY+RAFSDKPH+MVSGFAK ERI+KCL L++LHL
Sbjct: 357 ILNAHSLSETCTEAFIVRIIRSLNPAAYVRAFSDKPHAMVSGFAKAERIMKCLFLRRLHL 416

Query: 146 WPRFQVYVSQDLEKDPPVVVDIRVSLSVHMKGIQKAIIEAMDGCLKEI 3
           WPRFQV+VSQ+LE+ PPVVVDIRV ++ HM+GIQKAI+E +D CLKE+
Sbjct: 417 WPRFQVHVSQELERCPPVVVDIRVPMTAHMQGIQKAIVEVLDACLKEM 464


>ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like [Glycine max]
          Length = 967

 Score =  169 bits (429), Expect = 2e-40
 Identities = 79/108 (73%), Positives = 95/108 (87%)
 Frame = -2

Query: 326 ILNAHHITDTCTESFIVRIFRSFNKNAYIRAFSDKPHSMVSGFAKTERIIKCLGLKKLHL 147
           ILNAH +++T TE+FIVRIFRS N+ AY+RAFSDKPH+MVSGFAK ER +KCL ++KLHL
Sbjct: 124 ILNAHSLSETSTEAFIVRIFRSLNRGAYVRAFSDKPHAMVSGFAKAERTMKCLHVRKLHL 183

Query: 146 WPRFQVYVSQDLEKDPPVVVDIRVSLSVHMKGIQKAIIEAMDGCLKEI 3
           WPRFQVYVSQ+LE+DPP VVDIRV +S +M GIQKAI+E MD CLKE+
Sbjct: 184 WPRFQVYVSQELERDPPEVVDIRVPMSRYMVGIQKAIVEVMDACLKEM 231


>ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like [Cucumis sativus]
           gi|449505229|ref|XP_004162411.1| PREDICTED: DNA repair
           endonuclease UVH1-like [Cucumis sativus]
          Length = 1003

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/108 (69%), Positives = 94/108 (87%)
 Frame = -2

Query: 326 ILNAHHITDTCTESFIVRIFRSFNKNAYIRAFSDKPHSMVSGFAKTERIIKCLGLKKLHL 147
           ILNAH +++T TE+FIVRI RS N+NAY+R FSDKPH+MVSGFAK ERI+KCL +++LHL
Sbjct: 127 ILNAHSLSETSTEAFIVRIIRSHNRNAYVRVFSDKPHAMVSGFAKAERIMKCLYVRRLHL 186

Query: 146 WPRFQVYVSQDLEKDPPVVVDIRVSLSVHMKGIQKAIIEAMDGCLKEI 3
           WPRFQV VS++LE++PP VVDIRV ++ +M GIQKAIIE MD CLKE+
Sbjct: 187 WPRFQVNVSEELERNPPDVVDIRVPMTKYMVGIQKAIIEVMDACLKEM 234


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