BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019665
         (1244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    86   2e-14
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    79   2e-13
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    77   7e-12
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi...    75   5e-11
gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               72   2e-10

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1936

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 39/122 (31%), Positives = 67/122 (54%)
 Frame = -1

Query: 368 AASTTMIQAWNCQGISSSTAIQNLKGLISRFDPDIVCLSKTKVGCERMRGISKIVKYSGC 189
           AA      AWNC+G+ ++  +Q+L+ LI +    +V L +T+   E+M  + + + + G 
Sbjct: 632 AAGAMSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGF 691

Query: 188 FSVPARGQSGGLAVLWKEDVDLEILGTTRNQVTSKLNHYISNNQWFFTFVYGEPLACNRH 9
             V + G+SGGLA+ W E V +++    +  + + +       QW  TFVYGEP   NRH
Sbjct: 692 VGVSSEGKSGGLALYWDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFVYGEPRVENRH 751

Query: 8   KV 3
           ++
Sbjct: 752 RM 753


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1585

 Score = 79.0 bits (193), Expect(2) = 2e-13
 Identities = 41/124 (33%), Positives = 64/124 (51%)
 Frame = -1

Query: 374 STAASTTMIQAWNCQGISSSTAIQNLKGLISRFDPDIVCLSKTKVGCERMRGISKIVKYS 195
           S AA      +WNC+GI ++T +Q L  L+       V L +T+   ++++ +   +   
Sbjct: 456 SGAAGAMNCLSWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLR 515

Query: 194 GCFSVPARGQSGGLAVLWKEDVDLEILGTTRNQVTSKLNHYISNNQWFFTFVYGEPLACN 15
           G   V + G SGGLA+ W E V +EIL      + + +    ++  W  TFVYGEP   N
Sbjct: 516 GFAGVSSDGMSGGLALFWHESVHVEILNKNERFIDAYIRLSPNDPLWHATFVYGEPRVEN 575

Query: 14  RHKV 3
           RHK+
Sbjct: 576 RHKM 579



 Score = 24.3 bits (51), Expect(2) = 2e-13
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -2

Query: 622 RNVASSAGYNRSAHGRTKWKGESSGISRVSGRGAPGKSDDLGANTEMEN 476
           RN+  S G ++ A G TK +         SGR       +   +T+ME+
Sbjct: 402 RNMQVSGGGSQDAEGLTKGRKTKQARPAPSGRALKRVRKEATGDTQMED 450


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1557

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 38/114 (33%), Positives = 61/114 (53%)
 Frame = -1

Query: 344 AWNCQGISSSTAIQNLKGLISRFDPDIVCLSKTKVGCERMRGISKIVKYSGCFSVPARGQ 165
           +WNC+GI ++T +Q L  L+       V L +T+   ++++ +   +   G   V + G 
Sbjct: 438 SWNCRGIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVSSDGM 497

Query: 164 SGGLAVLWKEDVDLEILGTTRNQVTSKLNHYISNNQWFFTFVYGEPLACNRHKV 3
           SGGLA+ W E V +EIL      + + +    ++  W  TFVYGEP   NRHK+
Sbjct: 498 SGGLALFWHESVHVEILNKNERFIDAYIRLSPNDPLWHATFVYGEPRVENRHKM 551


>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score = 74.7 bits (182), Expect = 5e-11
 Identities = 37/113 (32%), Positives = 59/113 (52%)
 Frame = -1

Query: 341 WNCQGISSSTAIQNLKGLISRFDPDIVCLSKTKVGCERMRGISKIVKYSGCFSVPARGQS 162
           WNC+GI ++  +++L  L       +V L +T+   ERMR +   +   G       G S
Sbjct: 6   WNCRGIGNAATVRDLCALSREAGSQLVFLCETRQSVERMRRLRSRLGLRGFVGENCNGMS 65

Query: 161 GGLAVLWKEDVDLEILGTTRNQVTSKLNHYISNNQWFFTFVYGEPLACNRHKV 3
           GGLA+ W E V +EI G     + + +   +++  W  TFVYGEP   +RH++
Sbjct: 66  GGLALFWDESVFVEIKGINERYIDAYVRLSVNDPIWHVTFVYGEPRVEHRHRM 118


>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
 Frame = -1

Query: 341 WNCQGISSSTAIQNLKGLISRFDPDIVCLSKTKVGCERMRGISKIVKYSGCFSVPARGQS 162
           WNCQG+     ++ LK +  ++ PD++CLS+TK   + +R     + +S    VP+ G S
Sbjct: 59  WNCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMGLS 118

Query: 161 GGLAVLWKEDVDLEILGTTRNQVTSKLNHYISNNQWFF--TFVYGEPLACNRHKV 3
           GGL VLWK  V + +   + N V    + Y+ +N+  F  +FVYG P   +R+ +
Sbjct: 119 GGLVVLWKPSVHISVSFNSPNLV----DCYVQSNEVGFNLSFVYGHPNPSHRNNL 169