BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019642
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|XP_002313924.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 hom...    57   2e-06
ref|XP_002300284.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...    55   6e-06

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
 Frame = -1

Query: 367 YPQMMQQLXXXXXXXXXXXXXXQAVPPPFLHPNRPLTSIPSQPLQNTQHLNNHVSSVGGM 188
           + Q MQQL              Q +P P++  NRPLTS   QP Q    LN+H+  + G 
Sbjct: 78  FSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQPNQTAPPLNSHMPGLAGP 137

Query: 187 GTPLSSSYTFA---YSHPQNGITTSSQYQPMSHMPAP 86
           G P SSSYTFA   +  PQ+ I  S+Q+QP+S M AP
Sbjct: 138 GMPFSSSYTFAPASFGQPQSTINASAQFQPISQMHAP 174


>ref|XP_002313924.1| predicted protein [Populus trichocarpa] gi|222850332|gb|EEE87879.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
 Frame = -1

Query: 298 AVPPPFLHPNRPLTSIPSQPLQNTQHLNNHVSSVGGMGTPLSSSYTFA-YSHPQNGITTS 122
           A+  P   PNR + S    P  + Q  NN++  +GG+G PLSSSYTFA  SH Q  +T +
Sbjct: 40  AILLPNAQPNRHVMSGSPLPPHSVQTPNNYMPGLGGLGVPLSSSYTFAPSSHGQPPVTFN 99

Query: 121 --SQYQPMSHMPAP 86
             SQYQPM  M AP
Sbjct: 100 AVSQYQPMPQMHAP 113


>ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine
           max]
          Length = 1002

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
 Frame = -1

Query: 367 YPQMMQQLXXXXXXXXXXXXXXQAVPPPFLHPNRPLTSIPSQPLQNTQHLNNHVSSVG-G 191
           Y Q MQQL              QA+P  ++  NRPLTSIP    QN   L+NH+  +   
Sbjct: 56  YSQPMQQLTQRPMQPGHPAPSSQAIPMQYIQTNRPLTSIPPHSQQNVPPLSNHMPGLAVS 115

Query: 190 MGTPLSSSYTFAYSHPQNGITTSSQYQPMSHMPAP 86
           +  P SS +T +Y   Q+     +QYQ    M AP
Sbjct: 116 VAAPHSSYFTLSYGQQQDNANALAQYQHPPQMFAP 150


>ref|XP_002300284.1| predicted protein [Populus trichocarpa] gi|222847542|gb|EEE85089.1|
           predicted protein [Populus trichocarpa]
          Length = 972

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
 Frame = -1

Query: 367 YPQMMQQLXXXXXXXXXXXXXXQAVPPPFLHPNRPLTSIPSQPLQNTQHLNNHVSSVGGM 188
           +P  MQQL              QA+P P   PNR + S    P  + Q  N+++  +GG 
Sbjct: 55  FPHPMQQLPARPNQPSLGPPPPQAIPLPNAQPNRHVMSGSPLPPPSVQTPNSYMPGLGGP 114

Query: 187 GTPLSSSYTFA---YSHPQNGITTSSQYQPMSHM 95
           G PLSSSYTFA   Y  P       +Q+QPM  M
Sbjct: 115 GVPLSSSYTFAPSSYGQPPVTFNAVTQFQPMPQM 148


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/94 (36%), Positives = 46/94 (48%)
 Frame = -1

Query: 367 YPQMMQQLXXXXXXXXXXXXXXQAVPPPFLHPNRPLTSIPSQPLQNTQHLNNHVSSVGGM 188
           + Q MQQL              Q +P P++  NRPLTS   QP Q    LN+H+    G+
Sbjct: 92  FSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQPNQTAPPLNSHMP---GL 148

Query: 187 GTPLSSSYTFAYSHPQNGITTSSQYQPMSHMPAP 86
             P S      +  PQ+ I  S+Q+QP+S M AP
Sbjct: 149 FAPAS------FGQPQSTINASAQFQPISQMHAP 176