BLASTX nr result

ID: Coptis21_contig00019579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019579
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305534.1| predicted protein [Populus trichocarpa] gi|2...   242   4e-62
ref|XP_004166087.1| PREDICTED: transportin-1-like [Cucumis sativus]   240   2e-61
ref|XP_004147054.1| PREDICTED: transportin-1-like [Cucumis sativus]   240   2e-61
emb|CAE05776.2| OSJNBb0020J19.5 [Oryza sativa Japonica Group]         238   6e-61
dbj|BAJ93230.1| predicted protein [Hordeum vulgare subsp. vulgare]    237   1e-60

>ref|XP_002305534.1| predicted protein [Populus trichocarpa] gi|222848498|gb|EEE86045.1|
           predicted protein [Populus trichocarpa]
          Length = 888

 Score =  242 bits (618), Expect = 4e-62
 Identities = 123/186 (66%), Positives = 139/186 (74%), Gaps = 2/186 (1%)
 Frame = -3

Query: 553 SSTWQPKEEGLREICGLLEQNISPNF--DKSRIWQQLQHYSQFPDFNNYLSFILARAEGT 380
           ++ WQP+EEG +EICGLLE  ISP    DKS+IW+QLQH SQFPDFNNYL+FIL+RAEG 
Sbjct: 6   AAAWQPQEEGFKEICGLLEHQISPTSTADKSQIWKQLQHISQFPDFNNYLAFILSRAEGK 65

Query: 379 PVEIRQAAGXXXXXXXXNGFKSMAPSNQQYVKSELLPCLGAVDRHIRSXXXXXXXXXXXX 200
            VEIRQAAG        N +K+M P NQQY+KSELLPCLGA DRHIRS            
Sbjct: 66  SVEIRQAAGLLLKNNLRNAYKTMTPDNQQYIKSELLPCLGAADRHIRSTAGTIISVIVQL 125

Query: 199 XXXXGWLELLQALLHCLDSNDLNHMEGALDALSKICEDIPQELDVDVAGLAERPINIFLP 20
               GW ELLQA++ CLDSNDLNHMEGA+DALSKICEDIPQ LD DV GL+ERPI IFLP
Sbjct: 126 GGILGWPELLQAVITCLDSNDLNHMEGAMDALSKICEDIPQVLDSDVPGLSERPIKIFLP 185

Query: 19  PLLKFF 2
            L +FF
Sbjct: 186 RLYQFF 191


>ref|XP_004166087.1| PREDICTED: transportin-1-like [Cucumis sativus]
          Length = 627

 Score =  240 bits (613), Expect = 2e-61
 Identities = 122/186 (65%), Positives = 136/186 (73%), Gaps = 2/186 (1%)
 Frame = -3

Query: 553 SSTWQPKEEGLREICGLLEQNISP--NFDKSRIWQQLQHYSQFPDFNNYLSFILARAEGT 380
           S++W P+E G  EICGLLEQ ISP  N DKS+IWQQLQ YSQFPDFNNYL+FILARAEG 
Sbjct: 4   SASWHPQENGFNEICGLLEQQISPTSNPDKSQIWQQLQQYSQFPDFNNYLAFILARAEGK 63

Query: 379 PVEIRQAAGXXXXXXXXNGFKSMAPSNQQYVKSELLPCLGAVDRHIRSXXXXXXXXXXXX 200
            VE+RQAAG          +KSM P  QQY+KSELLPC+GA DRHIRS            
Sbjct: 64  SVEVRQAAGLLLKNNLRTAYKSMTPVFQQYIKSELLPCMGAADRHIRSTVGTIISVIVQL 123

Query: 199 XXXXGWLELLQALLHCLDSNDLNHMEGALDALSKICEDIPQELDVDVAGLAERPINIFLP 20
               GW ELLQAL+ CLDS D NHMEGA+DALSKICEDIPQ LD DV GL+ERPIN+FLP
Sbjct: 124 GGILGWPELLQALVRCLDSKDQNHMEGAMDALSKICEDIPQVLDSDVPGLSERPINVFLP 183

Query: 19  PLLKFF 2
            L +FF
Sbjct: 184 RLFQFF 189


>ref|XP_004147054.1| PREDICTED: transportin-1-like [Cucumis sativus]
          Length = 891

 Score =  240 bits (613), Expect = 2e-61
 Identities = 122/186 (65%), Positives = 136/186 (73%), Gaps = 2/186 (1%)
 Frame = -3

Query: 553 SSTWQPKEEGLREICGLLEQNISP--NFDKSRIWQQLQHYSQFPDFNNYLSFILARAEGT 380
           S++W P+E G  EICGLLEQ ISP  N DKS+IWQQLQ YSQFPDFNNYL+FILARAEG 
Sbjct: 4   SASWHPQENGFNEICGLLEQQISPTSNPDKSQIWQQLQQYSQFPDFNNYLAFILARAEGK 63

Query: 379 PVEIRQAAGXXXXXXXXNGFKSMAPSNQQYVKSELLPCLGAVDRHIRSXXXXXXXXXXXX 200
            VE+RQAAG          +KSM P  QQY+KSELLPC+GA DRHIRS            
Sbjct: 64  SVEVRQAAGLLLKNNLRTAYKSMTPVFQQYIKSELLPCMGAADRHIRSTVGTIISVIVQL 123

Query: 199 XXXXGWLELLQALLHCLDSNDLNHMEGALDALSKICEDIPQELDVDVAGLAERPINIFLP 20
               GW ELLQAL+ CLDS D NHMEGA+DALSKICEDIPQ LD DV GL+ERPIN+FLP
Sbjct: 124 GGILGWPELLQALVRCLDSKDQNHMEGAMDALSKICEDIPQVLDSDVPGLSERPINVFLP 183

Query: 19  PLLKFF 2
            L +FF
Sbjct: 184 RLFQFF 189


>emb|CAE05776.2| OSJNBb0020J19.5 [Oryza sativa Japonica Group]
          Length = 1077

 Score =  238 bits (608), Expect = 6e-61
 Identities = 116/188 (61%), Positives = 139/188 (73%)
 Frame = -3

Query: 565 MSLVSSTWQPKEEGLREICGLLEQNISPNFDKSRIWQQLQHYSQFPDFNNYLSFILARAE 386
           M+  ++ WQP+EEGLREIC LL+ +ISPN D++RIWQQLQHYSQFPDFNNYL F+LAR E
Sbjct: 1   MAAAAALWQPQEEGLREICTLLDAHISPNSDQARIWQQLQHYSQFPDFNNYLVFLLARGE 60

Query: 385 GTPVEIRQAAGXXXXXXXXNGFKSMAPSNQQYVKSELLPCLGAVDRHIRSXXXXXXXXXX 206
           G   E RQAAG          F SM P++QQYVKSELLPC+GA ++ IRS          
Sbjct: 61  GKSFEARQAAGLLLKNNLRATFSSMPPASQQYVKSELLPCIGATNKAIRSTVGTVISVLF 120

Query: 205 XXXXXXGWLELLQALLHCLDSNDLNHMEGALDALSKICEDIPQELDVDVAGLAERPINIF 26
                 GW+EL QAL  CLDSNDL+HMEGA+DA+ KICED+P+ELDVDV GL ERPIN+F
Sbjct: 121 QIVRVAGWIELFQALHQCLDSNDLDHMEGAMDAIYKICEDVPEELDVDVPGLPERPINVF 180

Query: 25  LPPLLKFF 2
           +P LL+FF
Sbjct: 181 MPRLLQFF 188


>dbj|BAJ93230.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 893

 Score =  237 bits (605), Expect = 1e-60
 Identities = 113/184 (61%), Positives = 139/184 (75%)
 Frame = -3

Query: 553 SSTWQPKEEGLREICGLLEQNISPNFDKSRIWQQLQHYSQFPDFNNYLSFILARAEGTPV 374
           ++ WQP+EEGLREIC +LE +ISPN D++RIWQQLQHY+QFPDFNNYL F+LAR +G   
Sbjct: 7   TALWQPQEEGLREICAVLEAHISPNSDQARIWQQLQHYAQFPDFNNYLVFLLARGQGKSF 66

Query: 373 EIRQAAGXXXXXXXXNGFKSMAPSNQQYVKSELLPCLGAVDRHIRSXXXXXXXXXXXXXX 194
           E+RQAAG          F SM PS+QQY+KSELLPC+GA +R IRS              
Sbjct: 67  EVRQAAGLLLKNNLRAAFVSMPPSSQQYIKSELLPCIGANNRAIRSTVGTVISVLFQIVG 126

Query: 193 XXGWLELLQALLHCLDSNDLNHMEGALDALSKICEDIPQELDVDVAGLAERPINIFLPPL 14
             GW+EL QAL  CLDSNDL+HMEGA+DA+ KICED+P+ELDVDV GL+ERPIN+F+P +
Sbjct: 127 VAGWIELFQALHQCLDSNDLDHMEGAMDAIYKICEDVPEELDVDVPGLSERPINVFMPRM 186

Query: 13  LKFF 2
           L+FF
Sbjct: 187 LQFF 190


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