BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019549
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516590.1| pentatricopeptide repeat-containing protein,...   131   5e-29
ref|XP_002884209.1| pentatricopeptide repeat-containing protein ...   126   2e-27
ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containi...   124   1e-26
ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
ref|XP_002324255.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26

>ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544410|gb|EEF45931.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/111 (57%), Positives = 79/111 (71%)
 Frame = +1

Query: 1   GRLGHLKEAVEFIHKMPIQPDSSIWGSILSASRTCRDLETAIIAMEQLLKLEPDDIGNYV 180
           GR G L +A++ + KMP++PDS IWGS+LS+ RT  ++E A+IAME L +LEPDD GNYV
Sbjct: 375 GRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELEPDDTGNYV 434

Query: 181 LLSNIFADLGEWECVSXXXXXXXXXXXXXXPGCSLIEVNNEVHEFVVGDDS 333
           LLSNI+ADLG+W+ VS              PGCSLIEVNN   EFV GDDS
Sbjct: 435 LLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNNVAQEFVSGDDS 485


>ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330049|gb|EFH60468.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 534

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/110 (55%), Positives = 79/110 (71%)
 Frame = +1

Query: 4   RLGHLKEAVEFIHKMPIQPDSSIWGSILSASRTCRDLETAIIAMEQLLKLEPDDIGNYVL 183
           R G L+ AVE    MP++PDS IWGS+LS+ RT  +L+ A++AM+ L+++EPDD+GNYVL
Sbjct: 390 RAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGNLDVALVAMDHLVEVEPDDMGNYVL 449

Query: 184 LSNIFADLGEWECVSXXXXXXXXXXXXXXPGCSLIEVNNEVHEFVVGDDS 333
           L+NI+ADLG+WE VS              PGCSLIEVNN V EFV GD+S
Sbjct: 450 LANIYADLGKWEDVSRLRKIIRKENMKKTPGCSLIEVNNIVQEFVAGDNS 499


>ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Vitis vinifera]
          Length = 541

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/111 (55%), Positives = 78/111 (70%)
 Frame = +1

Query: 1   GRLGHLKEAVEFIHKMPIQPDSSIWGSILSASRTCRDLETAIIAMEQLLKLEPDDIGNYV 180
           G  G L +A+E I KMP++PDS+IWGS+LS+ R+  +LE A+IAME LL+LEP D GNYV
Sbjct: 397 GLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGNYV 456

Query: 181 LLSNIFADLGEWECVSXXXXXXXXXXXXXXPGCSLIEVNNEVHEFVVGDDS 333
           LLSN++ADLG+W+ VS              PGCS IEV+N V EF  GDDS
Sbjct: 457 LLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCSSIEVDNMVQEFASGDDS 507


>ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 535

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/111 (55%), Positives = 78/111 (70%)
 Frame = +1

Query: 1   GRLGHLKEAVEFIHKMPIQPDSSIWGSILSASRTCRDLETAIIAMEQLLKLEPDDIGNYV 180
           GR G +++A++ I KMP+QPDS  W S+LS+ R   +LE A++AMEQLLKLEP++ GNYV
Sbjct: 386 GRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIHHNLEIAVVAMEQLLKLEPEESGNYV 445

Query: 181 LLSNIFADLGEWECVSXXXXXXXXXXXXXXPGCSLIEVNNEVHEFVVGDDS 333
           LL+NI+A L +WE VS              PGCSLIEVNN V EFV GDDS
Sbjct: 446 LLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSLIEVNNLVQEFVSGDDS 496


>ref|XP_002324255.1| predicted protein [Populus trichocarpa] gi|222865689|gb|EEF02820.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  122 bits (307), Expect = 2e-26
 Identities = 62/111 (55%), Positives = 77/111 (69%)
 Frame = +1

Query: 1   GRLGHLKEAVEFIHKMPIQPDSSIWGSILSASRTCRDLETAIIAMEQLLKLEPDDIGNYV 180
           GR G L +A++ I KMP++PDS IWGS+LS+ RT  +L+ AIIAME L +LEPDD GNYV
Sbjct: 399 GRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLDIAIIAMEHLEELEPDDTGNYV 458

Query: 181 LLSNIFADLGEWECVSXXXXXXXXXXXXXXPGCSLIEVNNEVHEFVVGDDS 333
           LLSNI+ADL +W+ VS              PG SLI++NN V EFV  DDS
Sbjct: 459 LLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGSSLIDINNVVQEFVSWDDS 509