BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019518
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containi...   290   1e-76
ref|XP_002515001.1| pentatricopeptide repeat-containing protein,...   288   5e-76
ref|XP_002315631.1| predicted protein [Populus trichocarpa] gi|2...   272   3e-71
ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containi...   262   3e-68
ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containi...   262   3e-68

>ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial [Vitis vinifera]
          Length = 496

 Score =  290 bits (742), Expect = 1e-76
 Identities = 131/196 (66%), Positives = 160/196 (81%)
 Frame = -3

Query: 588 QALLRDQFCCSIQPSSGLVDTLLFRFEDDWKSAFGVFKWAGARLGYKHTPQAYAKTVDIL 409
           ++L+ D+ C +I  S  LVD LL RF+DDWKSA G+F+WA +RLGY+H P+AY   VDIL
Sbjct: 63  KSLVHDEACNAIPMSQNLVDVLLHRFKDDWKSALGLFRWAESRLGYEHAPEAYDMMVDIL 122

Query: 408 GKAKKISRMLLLLDEMREGNRVTLEIIAKVMRRLCGAGKWEDAIKIFDDLGTFGLEKNTE 229
           GK K++ +M  L++EMR+GN V L  +AK MRRL GAG+WEDA+++FDDLG F LEKNTE
Sbjct: 123 GKLKQVDKMRALMEEMRQGNLVRLSTVAKAMRRLAGAGEWEDAVRVFDDLGNFELEKNTE 182

Query: 228 TMNLLLDTLCKEKRVHLARDVFFELKRHISPNAHTFNIFIHGWCKYNRVDEANWTLQEMK 49
           +MNLLLDTLCKE++V  AR +F ELK HISPN HTFNIFIHGWCK NRVDEA WT+QEMK
Sbjct: 183 SMNLLLDTLCKERKVEQARAIFLELKPHISPNTHTFNIFIHGWCKANRVDEAEWTIQEMK 242

Query: 48  GHGCTPCVITYSTIVQ 1
           GHGC PCVI+YSTI+Q
Sbjct: 243 GHGCRPCVISYSTIIQ 258


>ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546052|gb|EEF47555.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 466

 Score =  288 bits (737), Expect = 5e-76
 Identities = 131/196 (66%), Positives = 162/196 (82%)
 Frame = -3

Query: 588 QALLRDQFCCSIQPSSGLVDTLLFRFEDDWKSAFGVFKWAGARLGYKHTPQAYAKTVDIL 409
           Q+L+ D+ C SI  S  LVD LLFRF+DDWKSA GVF+WA +R GYKH+P+AY   VDI+
Sbjct: 36  QSLVHDEVCNSIHLSHELVDKLLFRFKDDWKSALGVFRWAESRAGYKHSPEAYDTMVDIM 95

Query: 408 GKAKKISRMLLLLDEMREGNRVTLEIIAKVMRRLCGAGKWEDAIKIFDDLGTFGLEKNTE 229
           GK K++ +M  LL+EM +G  VTL+ + K MRR  GA +WE+ +++FD LGTFGLEKNTE
Sbjct: 96  GKMKQMDQMEFLLEEMEKGQHVTLKTVGKAMRRFAGARQWENVLRVFDKLGTFGLEKNTE 155

Query: 228 TMNLLLDTLCKEKRVHLARDVFFELKRHISPNAHTFNIFIHGWCKYNRVDEANWTLQEMK 49
           +MNLLLDTLCKE++V LAR++F +LK HISPNA+TFNIFIHGWCK NRV+EA WT+QEMK
Sbjct: 156 SMNLLLDTLCKERKVELAREIFLDLKSHISPNANTFNIFIHGWCKVNRVEEAYWTIQEMK 215

Query: 48  GHGCTPCVITYSTIVQ 1
           GHGCTPCVI+YSTIVQ
Sbjct: 216 GHGCTPCVISYSTIVQ 231


>ref|XP_002315631.1| predicted protein [Populus trichocarpa] gi|222864671|gb|EEF01802.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  272 bits (696), Expect = 3e-71
 Identities = 128/194 (65%), Positives = 152/194 (78%)
 Frame = -3

Query: 585 ALLRDQFCCSIQPSSGLVDTLLFRFEDDWKSAFGVFKWAGARLGYKHTPQAYAKTVDILG 406
           +L  +Q C +I+ S+ LVD LL RF+DDWKSA GVF+WAG R GYKH P+AY   VDILG
Sbjct: 26  SLADEQVCDNIEVSNDLVDKLLLRFKDDWKSALGVFRWAGLRPGYKHRPEAYDMMVDILG 85

Query: 405 KAKKISRMLLLLDEMREGNRVTLEIIAKVMRRLCGAGKWEDAIKIFDDLGTFGLEKNTET 226
           K K++ +M  LL+EM   + VTL  + K MRR  GAGKWEDA+++FD+LGTFGLEKN E+
Sbjct: 86  KMKQMDQMRELLEEMNRNHLVTLNTVGKAMRRFSGAGKWEDAVRMFDELGTFGLEKNAES 145

Query: 225 MNLLLDTLCKEKRVHLARDVFFELKRHISPNAHTFNIFIHGWCKYNRVDEANWTLQEMKG 46
           MNLLLDTLCKE +V  AR +F ELK HI PNAHTFNIFIHGWCK N VDEA+WTLQEMKG
Sbjct: 146 MNLLLDTLCKEGKVEQARAIFLELKSHILPNAHTFNIFIHGWCKANLVDEAHWTLQEMKG 205

Query: 45  HGCTPCVITYSTIV 4
           H   PCVI+YSTI+
Sbjct: 206 HAFRPCVISYSTII 219


>ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 488

 Score =  262 bits (670), Expect = 3e-68
 Identities = 121/195 (62%), Positives = 156/195 (80%)
 Frame = -3

Query: 588 QALLRDQFCCSIQPSSGLVDTLLFRFEDDWKSAFGVFKWAGARLGYKHTPQAYAKTVDIL 409
           Q+LL+D  C SIQ S  LV  LL RF+DDWKSA GVF+WA +  G+KHTP  Y   +D L
Sbjct: 58  QSLLQDPVCNSIQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDTL 117

Query: 408 GKAKKISRMLLLLDEMREGNRVTLEIIAKVMRRLCGAGKWEDAIKIFDDLGTFGLEKNTE 229
           GK K++ +M  +L+EM+E   VTL+ +AK MRR  GAG+WE+A++IFDDL T+GLEKNTE
Sbjct: 118 GKTKQLVKMRGMLEEMKEARLVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTE 177

Query: 228 TMNLLLDTLCKEKRVHLARDVFFELKRHISPNAHTFNIFIHGWCKYNRVDEANWTLQEMK 49
           +MN+LLDTLCKEK+V  AR ++ ELK HI+PNA+TFN+FIHGWCK N++DEA+WTL+EMK
Sbjct: 178 SMNVLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMK 237

Query: 48  GHGCTPCVITYSTIV 4
           G+G  PCVI+YSTI+
Sbjct: 238 GYGHRPCVISYSTII 252


>ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
           mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  262 bits (670), Expect = 3e-68
 Identities = 121/195 (62%), Positives = 156/195 (80%)
 Frame = -3

Query: 588 QALLRDQFCCSIQPSSGLVDTLLFRFEDDWKSAFGVFKWAGARLGYKHTPQAYAKTVDIL 409
           Q+LL+D  C SIQ S  LV  LL RF+DDWKSA GVF+WA +  G+KHTP  Y   +D L
Sbjct: 89  QSLLQDPVCNSIQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDTL 148

Query: 408 GKAKKISRMLLLLDEMREGNRVTLEIIAKVMRRLCGAGKWEDAIKIFDDLGTFGLEKNTE 229
           GK K++ +M  +L+EM+E   VTL+ +AK MRR  GAG+WE+A++IFDDL T+GLEKNTE
Sbjct: 149 GKTKQLVKMRGMLEEMKEARLVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTE 208

Query: 228 TMNLLLDTLCKEKRVHLARDVFFELKRHISPNAHTFNIFIHGWCKYNRVDEANWTLQEMK 49
           +MN+LLDTLCKEK+V  AR ++ ELK HI+PNA+TFN+FIHGWCK N++DEA+WTL+EMK
Sbjct: 209 SMNVLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMK 268

Query: 48  GHGCTPCVITYSTIV 4
           G+G  PCVI+YSTI+
Sbjct: 269 GYGHRPCVISYSTII 283