BLASTX nr result

ID: Coptis21_contig00019499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019499
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632840.1| PREDICTED: putative disease resistance prote...    67   1e-09
emb|CAN78626.1| hypothetical protein VITISV_034885 [Vitis vinifera]    66   3e-09
emb|CAN82921.1| hypothetical protein VITISV_033138 [Vitis vinifera]    62   5e-08
ref|XP_002267795.1| PREDICTED: putative disease resistance prote...    61   1e-07
emb|CAN62986.1| hypothetical protein VITISV_033996 [Vitis vinifera]    60   1e-07

>ref|XP_003632840.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 903

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 51/149 (34%), Positives = 70/149 (46%), Gaps = 47/149 (31%)
 Frame = +3

Query: 3   SLFQDFKKDSEGNVIGCKMHDLVHDFAQHLAKSESSI-----------------LRHI-- 125
           S FQDF+KD++GN+I CKMHD+VHDFAQ L ++E  I                 +RHI  
Sbjct: 456 SFFQDFEKDTDGNIIRCKMHDIVHDFAQFLTQNECFIVEVDNQQMESIDLSFKKIRHITL 515

Query: 126 ----GGANYV-------------EEELE---------IICQMTCLRVLDLSGT-YGEELP 224
                  N+V             +E  +         ++  +TCLR LDLS     EELP
Sbjct: 516 VVRESTPNFVSTYNMKNLHTLLAKEAFKSSVLVALPNLLRHLTCLRALDLSSNQLIEELP 575

Query: 225 DEVDXXXXXXXXXXSG-MEMKKLPETVCN 308
            EV           SG   +++LPET+C+
Sbjct: 576 KEVGKLIHLRFLNLSGCFWLRELPETICD 604


>emb|CAN78626.1| hypothetical protein VITISV_034885 [Vitis vinifera]
          Length = 1295

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 50/145 (34%), Positives = 64/145 (44%), Gaps = 43/145 (29%)
 Frame = +3

Query: 3   SLFQDFKKDSEGNVIGCKMHDLVHDFAQHLAKSESSIL--------------RHIGGANY 140
           S FQDF+KD +GN+I CKMHD+VHDFAQ L  +E  I+              + I  A  
Sbjct: 520 SFFQDFEKDXDGNIIRCKMHDIVHDFAQFLTXNECFIVEVXNQKKGSMDLFFQKIRHATL 579

Query: 141 VEEE---------------------------LEIICQMTCLRVLDLS-GTYGEELPDEVD 236
           V  E                           LE +  +TCLR LDLS     EELP EV 
Sbjct: 580 VVRESTPNFASTCNMKNLHTLLAKKAFDSRVLEALGHLTCLRALDLSRNRLIEELPKEVG 639

Query: 237 XXXXXXXXXXS-GMEMKKLPETVCN 308
                     S    +++LPET+C+
Sbjct: 640 KLIHLRYLNLSLCYSLRELPETICD 664



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 45/121 (37%), Positives = 59/121 (48%), Gaps = 19/121 (15%)
 Frame = +3

Query: 3    SLFQDFKKDSEGNVIGCKMHDLVHDFAQHLAKSESSI-----------------LRHIGG 131
            S FQDF+KD + ++I CKMHD+VHDFAQ L K+E  I                 +RH   
Sbjct: 968  SFFQDFEKDGDDDIIRCKMHDIVHDFAQFLTKNECFIMNVENAEEGRTKTSFQKIRH-AT 1026

Query: 132  ANYVEEELEIICQMTCLRVLDLS-GTYGEELPDEVDXXXXXXXXXXSGM-EMKKLPETVC 305
             N   E L      TCLR LDL+      ELP  V           S   ++++LPET+C
Sbjct: 1027 LNXATEHL------TCLRALDLARNPLIMELPKAVGKLIHLKYLSLSDCHKLRELPETIC 1080

Query: 306  N 308
            +
Sbjct: 1081 D 1081


>emb|CAN82921.1| hypothetical protein VITISV_033138 [Vitis vinifera]
          Length = 699

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = +3

Query: 3   SLFQDFKKDSEGNVIGCKMHDLVHDFAQHLAKSESSIL 116
           SLFQDF++D EGN+I CKMHD+VHD AQ+L K+E  IL
Sbjct: 467 SLFQDFRRDDEGNIISCKMHDIVHDLAQYLTKNECFIL 504


>ref|XP_002267795.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 928

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/38 (68%), Positives = 31/38 (81%)
 Frame = +3

Query: 3   SLFQDFKKDSEGNVIGCKMHDLVHDFAQHLAKSESSIL 116
           SLFQDF +D EGN+I CKMHD+VHD AQ+L K+E  IL
Sbjct: 477 SLFQDFDRDDEGNIISCKMHDIVHDLAQYLTKNECFIL 514


>emb|CAN62986.1| hypothetical protein VITISV_033996 [Vitis vinifera]
          Length = 628

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/75 (45%), Positives = 46/75 (61%)
 Frame = +3

Query: 3   SLFQDFKKDSEGNVIGCKMHDLVHDFAQHLAKSESSILRHIGGANYVEEELEIICQMTCL 182
           S FQDF+KD +G++IGCKMHD+VHDFAQ L ++E  I+    G   V E L+       L
Sbjct: 408 SFFQDFEKDDDGDIIGCKMHDIVHDFAQFLTQNECFIVEE--GTKGVAEALQ---PHPNL 462

Query: 183 RVLDLSGTYGEELPD 227
           + LD+S     E P+
Sbjct: 463 KSLDISYYGDREWPN 477


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