BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019497
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632510.1| PREDICTED: F-box protein GID2-like [Vitis vi...   137   3e-30
ref|XP_002510145.1| F-box protein GID2, putative [Ricinus commun...   137   4e-30
ref|XP_002301160.1| predicted protein [Populus trichocarpa] gi|2...   133   6e-29
ref|XP_002327183.1| predicted protein [Populus trichocarpa] gi|2...   132   8e-29
ref|XP_004141280.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   130   5e-28

>ref|XP_003632510.1| PREDICTED: F-box protein GID2-like [Vitis vinifera]
          Length = 184

 Score =  137 bits (345), Expect = 3e-30
 Identities = 74/154 (48%), Positives = 90/154 (58%), Gaps = 16/154 (10%)
 Frame = -2

Query: 565 EEQGGYEQAAVFTNLGEDLLFEVLKHADPKTLASAACVSKQWSKTALDERLWEMIYTRHW 386
           EE G       F NL EDLLFEVLKH D +TLA+AACVS+QW +TA DERLWEMI TRHW
Sbjct: 27  EEDGEMMAETAFVNLDEDLLFEVLKHVDARTLATAACVSRQWKRTAHDERLWEMICTRHW 86

Query: 385 ASKTFSSNPEKLRSMVLTMGGFRRIYSQSLW----------------XXXXXXXXXXXXX 254
           A+       ++LRS+VL +GGFRR+++  LW                             
Sbjct: 87  AN--VGCGTQQLRSVVLALGGFRRLHALCLWPLLKSPPSSSSSPSPYTTSSHSPQSSPFS 144

Query: 253 XXXXXXPKMPTHWGKDEVHLSLSLLSIRYFQNMN 152
                  K PT WGKDEVHLSLSLLSIR+++ M+
Sbjct: 145 PPVVPSKKAPTRWGKDEVHLSLSLLSIRFYEKMS 178


>ref|XP_002510145.1| F-box protein GID2, putative [Ricinus communis]
           gi|223550846|gb|EEF52332.1| F-box protein GID2, putative
           [Ricinus communis]
          Length = 179

 Score =  137 bits (344), Expect = 4e-30
 Identities = 71/133 (53%), Positives = 85/133 (63%), Gaps = 6/133 (4%)
 Frame = -2

Query: 532 FTNLGEDLLFEVLKHADPKTLASAACVSKQWSKTALDERLWEMIYTRHWASKTFSSNPEK 353
           F NL E+LL+EVLKH D +TL  AACVSKQW +TA DERLWE+I TRHWA+       ++
Sbjct: 41  FVNLDENLLYEVLKHVDARTLGRAACVSKQWHRTAQDERLWELICTRHWAN--IGCGNQQ 98

Query: 352 LRSMVLTMGGFRRIYSQSLW------XXXXXXXXXXXXXXXXXXXPKMPTHWGKDEVHLS 191
           LRS+VL +GGFRR++SQ LW                          K P  WGKDEVHLS
Sbjct: 99  LRSVVLALGGFRRLHSQYLWPLSKPQSSTSAASSSSSWPSFPPIRSKPPARWGKDEVHLS 158

Query: 190 LSLLSIRYFQNMN 152
           LSLLSIRY++ MN
Sbjct: 159 LSLLSIRYYEKMN 171


>ref|XP_002301160.1| predicted protein [Populus trichocarpa] gi|222842886|gb|EEE80433.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  133 bits (334), Expect = 6e-29
 Identities = 68/136 (50%), Positives = 84/136 (61%), Gaps = 9/136 (6%)
 Frame = -2

Query: 532 FTNLGEDLLFEVLKHADPKTLASAACVSKQWSKTALDERLWEMIYTRHWASKTFSSNPEK 353
           F NL E+LLFEVLKH D +TL SAACVSKQW +T  DERLWE++ T+HW +       ++
Sbjct: 43  FMNLDENLLFEVLKHVDARTLGSAACVSKQWHRTVQDERLWELVCTKHWGN--MGCGNQQ 100

Query: 352 LRSMVLTMGGFRRIYSQSLWXXXXXXXXXXXXXXXXXXXP---------KMPTHWGKDEV 200
           +RS+VL +GGFRR++SQ LW                             K P  WGKDEV
Sbjct: 101 MRSVVLALGGFRRLHSQYLWPLSKPQSNSAGSASTSSSAWNPFSPMIGNKPPARWGKDEV 160

Query: 199 HLSLSLLSIRYFQNMN 152
           HLSLSLLSIRY++ MN
Sbjct: 161 HLSLSLLSIRYYEKMN 176


>ref|XP_002327183.1| predicted protein [Populus trichocarpa] gi|222835498|gb|EEE73933.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  132 bits (333), Expect = 8e-29
 Identities = 69/136 (50%), Positives = 84/136 (61%), Gaps = 9/136 (6%)
 Frame = -2

Query: 532 FTNLGEDLLFEVLKHADPKTLASAACVSKQWSKTALDERLWEMIYTRHWASKTFSSNPEK 353
           F NL E+LLFEVLKH D +TL  A+CVSKQW +T  DERLWE+I T+HWA+       ++
Sbjct: 44  FMNLDENLLFEVLKHVDARTLGRASCVSKQWHRTVQDERLWELICTKHWAN--IGCGNQQ 101

Query: 352 LRSMVLTMGGFRRIYSQSLW---------XXXXXXXXXXXXXXXXXXXPKMPTHWGKDEV 200
           LRS+VL +GGFRR++SQ LW                             K P  WGKDEV
Sbjct: 102 LRSVVLALGGFRRLHSQYLWPLSKPHSTPAPSSSSSPSAWNPFPKMIGNKPPARWGKDEV 161

Query: 199 HLSLSLLSIRYFQNMN 152
           HLSLSLLSIRY++ MN
Sbjct: 162 HLSLSLLSIRYYEKMN 177


>ref|XP_004141280.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein GID2-like [Cucumis
           sativus]
          Length = 185

 Score =  130 bits (326), Expect = 5e-28
 Identities = 70/142 (49%), Positives = 84/142 (59%), Gaps = 15/142 (10%)
 Frame = -2

Query: 532 FTNLGEDLLFEVLKHADPKTLASAACVSKQWSKTALDERLWEMIYTRHWASKTFSSNPEK 353
           F NL ++LLFEV KH D +TLA AACVSKQW KTA DERLWE+I TRHWA+       ++
Sbjct: 40  FMNLDDNLLFEVFKHVDARTLAMAACVSKQWHKTAEDERLWELICTRHWANT--GCGNQQ 97

Query: 352 LRSMVLTMGGFRRIYSQSLW---------------XXXXXXXXXXXXXXXXXXXPKMPTH 218
           LRS+VL +GGFRR++S  +W                                   K P  
Sbjct: 98  LRSVVLALGGFRRLHSLFIWPLTKPQSSSSSSSSHLHPSSSSSASWSPFPAMIGSKPPAR 157

Query: 217 WGKDEVHLSLSLLSIRYFQNMN 152
           WGKDEVHLSLSLLSIRY++ MN
Sbjct: 158 WGKDEVHLSLSLLSIRYYEKMN 179