BLASTX nr result

ID: Coptis21_contig00019483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019483
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313654.1| predicted protein [Populus trichocarpa] gi|2...   274   2e-71
ref|XP_002533606.1| hypothetical protein RCOM_1180720 [Ricinus c...   273   3e-71
ref|XP_003632265.1| PREDICTED: uncharacterized protein LOC100854...   260   3e-67
ref|XP_004139470.1| PREDICTED: uncharacterized protein LOC101222...   243   6e-62
ref|XP_004139471.1| PREDICTED: uncharacterized protein LOC101222...   234   2e-59

>ref|XP_002313654.1| predicted protein [Populus trichocarpa] gi|222850062|gb|EEE87609.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  274 bits (701), Expect = 2e-71
 Identities = 137/253 (54%), Positives = 178/253 (70%), Gaps = 9/253 (3%)
 Frame = -2

Query: 768 MQTLKNINLLYILYSWL-------SVAQPTP-ISFCGEVEIQTPFSLQNSTQSSPLSRIL 613
           M T K +N  Y L   L       S+ Q T   SFCG+++IQTPF   NST  SPL+R++
Sbjct: 1   MHTSKKLNFFYPLLLTLINFFFTSSLCQHTASTSFCGKIQIQTPFWSPNSTAKSPLNRMI 60

Query: 612 ICKSQKLYFRTTLGLLQVSSIDYKAKTLTISHSYCSSSLHFISPSLLSAGFPSPPQSNSV 433
           +C+SQKLYFRT+LGL  VSSI+Y +KTLTISHS CSSS H+ISPSLLSAGFP+PPQ NS+
Sbjct: 61  LCRSQKLYFRTSLGLFPVSSINYASKTLTISHSSCSSSRHYISPSLLSAGFPTPPQPNSL 120

Query: 432 LFFNCSSQKALMSPFLQNCTTFHGCKALSESKEQKQNAPSTCWMINDTEKLETGFDPKDL 253
           L FNC +  + M   + NC+  + C A ++++ QK  AP +C ++   E L+  F PKDL
Sbjct: 121 LLFNCLNSNSPMPSSMLNCSHLNPCAASAKTQRQKLEAPHSCSLVG-LENLDKAFHPKDL 179

Query: 252 NCSHYKRVYRDSASSFS-EGFKLGTIISFDIPDHVPNVCDECNKAKGNCGVGLRCICHPK 76
           NCSHY +VYR S      +G++LGT ISFDIPDHVP++C+EC K+ GNCGVGL+CICHP+
Sbjct: 180 NCSHYSQVYRRSLDDEDYKGYELGTRISFDIPDHVPDICNECQKSNGNCGVGLKCICHPQ 239

Query: 75  DCRDKVISRGVSL 37
           DC   + S  +SL
Sbjct: 240 DCSKHISSSVISL 252


>ref|XP_002533606.1| hypothetical protein RCOM_1180720 [Ricinus communis]
           gi|223526507|gb|EEF28775.1| hypothetical protein
           RCOM_1180720 [Ricinus communis]
          Length = 277

 Score =  273 bits (699), Expect = 3e-71
 Identities = 133/261 (50%), Positives = 179/261 (68%), Gaps = 9/261 (3%)
 Frame = -2

Query: 768 MQTLKNINLLYILYSWLSVAQPTPIS------FCGEVEIQTPFSLQNSTQSSPLSR-ILI 610
           MQT K +  ++ L S L++   T +S      FCG++ IQ+PF   NST SS L + +++
Sbjct: 1   MQTFKKLKFIHYLLSILNLCFITCLSHHISTSFCGKIPIQSPFLSSNSTVSSSLLKHMIL 60

Query: 609 CKSQKLYFRTTLGLLQVSSIDYKAKTLTISHSYCSSSLHFISPSLLSAGFPSPPQSNSVL 430
           C SQKL+FRT+LGL  VSSIDY  KT+TIS   C SS  F+SPSLLSAGFP+ P  NS++
Sbjct: 61  CSSQKLFFRTSLGLFPVSSIDYATKTITISQPSCPSSQQFVSPSLLSAGFPTSPMLNSLI 120

Query: 429 FFNCSSQKALMSPFLQNCTTFHGCKALSESKEQKQNAPSTCWMINDTEKLETGFDPKDLN 250
            FNCS++   ++    NC  F  C + S++  Q+   P +C ++N+ +KL+  F PKDLN
Sbjct: 121 LFNCSNKNYPITSSFSNCKNFKACSSSSDTPHQELKIPYSCLLVNNLDKLDKSFHPKDLN 180

Query: 249 CSHYKRVYRDSAS--SFSEGFKLGTIISFDIPDHVPNVCDECNKAKGNCGVGLRCICHPK 76
           CSHY R+YR S +    S G++LGT ISFDIPDHVPN+CDEC K  GNCGVGL+CICHPK
Sbjct: 181 CSHYSRIYRSSLNDDDNSIGYELGTRISFDIPDHVPNICDECEKPNGNCGVGLKCICHPK 240

Query: 75  DCRDKVISRGVSLEPFGNIFL 13
           +C++KVIS   S++P  NI +
Sbjct: 241 ECKNKVISTAGSIKPSANIVI 261


>ref|XP_003632265.1| PREDICTED: uncharacterized protein LOC100854742 [Vitis vinifera]
          Length = 219

 Score =  260 bits (665), Expect = 3e-67
 Identities = 126/208 (60%), Positives = 158/208 (75%), Gaps = 4/208 (1%)
 Frame = -2

Query: 612 ICKSQKLYFRTTLGLLQVSSIDYKAKTLTISH-SYCSSSLHFISPSLLSAGFPSPPQSNS 436
           +CKSQKLYFRTTLGL  +SSIDY +K LTISH + CSSSL F+SPSLLSAGFP+P   NS
Sbjct: 3   VCKSQKLYFRTTLGLFPISSIDYTSKILTISHPASCSSSLQFVSPSLLSAGFPTPTP-NS 61

Query: 435 VLFFNCSSQKALMSPFLQNCTT-FHGCKALSESKEQKQNAPSTCWMINDTEKLETGFDPK 259
           +L FNCS Q+  +S F++NCT  FHGC+  S+  E++    S+C +I+D EKL  GF+PK
Sbjct: 62  LLLFNCSDQRHPISLFIRNCTKRFHGCRVSSQVHEKELGLASSCLLIDDLEKLNMGFEPK 121

Query: 258 DLNCSHYKRVYRDSASSFSE--GFKLGTIISFDIPDHVPNVCDECNKAKGNCGVGLRCIC 85
           +LNCSHY RVYRDS+       GF+LGT ISF++P HVP++C EC K+ GNCGVGLRCIC
Sbjct: 122 ELNCSHYSRVYRDSSGDDDGDGGFELGTRISFEVPGHVPDICKECEKSNGNCGVGLRCIC 181

Query: 84  HPKDCRDKVISRGVSLEPFGNIFLSLLA 1
           HPK+C+DKV+S G S  P G I  SL++
Sbjct: 182 HPKECKDKVLSMGGSKSPLGTILFSLIS 209


>ref|XP_004139470.1| PREDICTED: uncharacterized protein LOC101222629 isoform 1 [Cucumis
           sativus] gi|449529690|ref|XP_004171831.1| PREDICTED:
           uncharacterized LOC101222629 [Cucumis sativus]
          Length = 269

 Score =  243 bits (619), Expect = 6e-62
 Identities = 127/264 (48%), Positives = 170/264 (64%), Gaps = 11/264 (4%)
 Frame = -2

Query: 759 LKNINLLYILYSWL--------SVAQPTPISFCGEVEIQTPF-SLQNSTQSSPLSRILIC 607
           ++ I   ++L S+L        S++Q    + CG+ +IQ PF S  N     PL+ +++C
Sbjct: 1   MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 60

Query: 606 KSQKLYFRTTLGLLQVSSIDYKAKTLTISHSYCSSSLHFISPSLLSAGFPSPPQS-NSVL 430
           +SQKLYFRT++GL  +S IDY  KTL IS+ + SSS HF+SPSLLS+G PSPP   NS+L
Sbjct: 61  RSQKLYFRTSIGLFPISKIDYTTKTLIISN-FLSSSHHFVSPSLLSSGLPSPPHLINSLL 119

Query: 429 FFNCSSQKALMSPFLQNCTTFHGCKALSESKEQKQNAPSTCWMINDTEKLETGFDPKDLN 250
            FNCS+    ++   QNC  F   +AL    E++ +  S+C +  D  KL+  F P DL 
Sbjct: 120 LFNCSNPTKPITESAQNCPKF---EALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLK 176

Query: 249 CSHYKRVYRDSAS-SFSEGFKLGTIISFDIPDHVPNVCDECNKAKGNCGVGLRCICHPKD 73
           CSH++RVYR+S+      G+KLGT ISFDIPDHVPN C EC K  G+CGVGLRCICH  D
Sbjct: 177 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLD 236

Query: 72  CRDKVISRGVSLEPFGNIFLSLLA 1
           C+DKV S+G  + P G   +SLLA
Sbjct: 237 CKDKVFSKGGIVRPCGKFLISLLA 260


>ref|XP_004139471.1| PREDICTED: uncharacterized protein LOC101222629 isoform 2 [Cucumis
           sativus]
          Length = 253

 Score =  234 bits (597), Expect = 2e-59
 Identities = 122/254 (48%), Positives = 164/254 (64%), Gaps = 11/254 (4%)
 Frame = -2

Query: 759 LKNINLLYILYSWL--------SVAQPTPISFCGEVEIQTPF-SLQNSTQSSPLSRILIC 607
           ++ I   ++L S+L        S++Q    + CG+ +IQ PF S  N     PL+ +++C
Sbjct: 1   MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 60

Query: 606 KSQKLYFRTTLGLLQVSSIDYKAKTLTISHSYCSSSLHFISPSLLSAGFPSPPQS-NSVL 430
           +SQKLYFRT++GL  +S IDY  KTL IS+ + SSS HF+SPSLLS+G PSPP   NS+L
Sbjct: 61  RSQKLYFRTSIGLFPISKIDYTTKTLIISN-FLSSSHHFVSPSLLSSGLPSPPHLINSLL 119

Query: 429 FFNCSSQKALMSPFLQNCTTFHGCKALSESKEQKQNAPSTCWMINDTEKLETGFDPKDLN 250
            FNCS+    ++   QNC  F   +AL    E++ +  S+C +  D  KL+  F P DL 
Sbjct: 120 LFNCSNPTKPITESAQNCPKF---EALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLK 176

Query: 249 CSHYKRVYRDSAS-SFSEGFKLGTIISFDIPDHVPNVCDECNKAKGNCGVGLRCICHPKD 73
           CSH++RVYR+S+      G+KLGT ISFDIPDHVPN C EC K  G+CGVGLRCICH  D
Sbjct: 177 CSHFRRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLD 236

Query: 72  CRDKVISRGVSLEP 31
           C+DKV S+G  + P
Sbjct: 237 CKDKVFSKGGIVRP 250


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