BLASTX nr result

ID: Coptis21_contig00019482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019482
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299351.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002512665.1| conserved hypothetical protein [Ricinus comm...   117   7e-25
ref|XP_004170409.1| PREDICTED: uncharacterized LOC101222632, par...   116   2e-24
ref|XP_004140557.1| PREDICTED: uncharacterized protein LOC101222...   116   2e-24
ref|XP_002269943.2| PREDICTED: uncharacterized protein LOC100267...   115   3e-24

>ref|XP_002299351.1| predicted protein [Populus trichocarpa] gi|222846609|gb|EEE84156.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/75 (77%), Positives = 63/75 (84%), Gaps = 4/75 (5%)
 Frame = -1

Query: 214 DDGNRPPRLPRWTRQEILVLIQGKKEAENRVRIRRPTS----SSQVTEPKWATVSSYCKR 47
           DDGN+ PRLPRWTRQEILVLIQGK+ AENRVR  R +     S Q+ EPKWA+VSSYCKR
Sbjct: 33  DDGNKAPRLPRWTRQEILVLIQGKRVAENRVRRGRASGMGIGSGQI-EPKWASVSSYCKR 91

Query: 46  HGVNRGPVQCRKRWS 2
           HGVNRGPVQCRKRWS
Sbjct: 92  HGVNRGPVQCRKRWS 106


>ref|XP_002512665.1| conserved hypothetical protein [Ricinus communis]
           gi|223548626|gb|EEF50117.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 347

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/80 (75%), Positives = 64/80 (80%), Gaps = 4/80 (5%)
 Frame = -1

Query: 229 SVTVNDDGNRPPRLPRWTRQEILVLIQGKKEAENRVRIRRPTS----SSQVTEPKWATVS 62
           S+   DDG++ PRLPRWTRQEILVLIQGKK AENRVR  R       S QV EPKWA+VS
Sbjct: 29  SIDGADDGSKTPRLPRWTRQEILVLIQGKKVAENRVRRGRTAGMAFGSGQV-EPKWASVS 87

Query: 61  SYCKRHGVNRGPVQCRKRWS 2
           SYCKRHGVNRGPVQCRKRWS
Sbjct: 88  SYCKRHGVNRGPVQCRKRWS 107


>ref|XP_004170409.1| PREDICTED: uncharacterized LOC101222632, partial [Cucumis sativus]
          Length = 214

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/75 (78%), Positives = 62/75 (82%), Gaps = 4/75 (5%)
 Frame = -1

Query: 214 DDGNRPPRLPRWTRQEILVLIQGKKEAENRVRIRRPTS----SSQVTEPKWATVSSYCKR 47
           DDG++ PRLPRWTRQEILVLIQGKK AE RVR  R  S    S QV EPKWA+VSSYCKR
Sbjct: 31  DDGSKTPRLPRWTRQEILVLIQGKKVAETRVRGGRAASLAFGSGQV-EPKWASVSSYCKR 89

Query: 46  HGVNRGPVQCRKRWS 2
           HGVNRGPVQCRKRWS
Sbjct: 90  HGVNRGPVQCRKRWS 104


>ref|XP_004140557.1| PREDICTED: uncharacterized protein LOC101222632 [Cucumis sativus]
          Length = 355

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/75 (78%), Positives = 62/75 (82%), Gaps = 4/75 (5%)
 Frame = -1

Query: 214 DDGNRPPRLPRWTRQEILVLIQGKKEAENRVRIRRPTS----SSQVTEPKWATVSSYCKR 47
           DDG++ PRLPRWTRQEILVLIQGKK AE RVR  R  S    S QV EPKWA+VSSYCKR
Sbjct: 31  DDGSKTPRLPRWTRQEILVLIQGKKVAETRVRGGRAASLAFGSGQV-EPKWASVSSYCKR 89

Query: 46  HGVNRGPVQCRKRWS 2
           HGVNRGPVQCRKRWS
Sbjct: 90  HGVNRGPVQCRKRWS 104


>ref|XP_002269943.2| PREDICTED: uncharacterized protein LOC100267783 [Vitis vinifera]
          Length = 340

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/75 (77%), Positives = 63/75 (84%), Gaps = 4/75 (5%)
 Frame = -1

Query: 214 DDGNRPPRLPRWTRQEILVLIQGKKEAENRVRIRRPTS----SSQVTEPKWATVSSYCKR 47
           DDG+R PRLPRWTRQEILVLIQGKK AE+RVR  R       S+Q+ EPKWA+VSSYCKR
Sbjct: 29  DDGSRAPRLPRWTRQEILVLIQGKKVAESRVRRGRTGGLAFGSAQI-EPKWASVSSYCKR 87

Query: 46  HGVNRGPVQCRKRWS 2
           HGVNRGPVQCRKRWS
Sbjct: 88  HGVNRGPVQCRKRWS 102


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