BLASTX nr result

ID: Coptis21_contig00019478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019478
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16436.3| unnamed protein product [Vitis vinifera]               80   4e-13
ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containi...    80   4e-13
emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]    80   4e-13
ref|NP_001147320.1| selenium-binding protein-like [Zea mays] gi|...    78   2e-12
gb|ACF82562.1| unknown [Zea mays] gi|413957085|gb|AFW89734.1| se...    78   2e-12

>emb|CBI16436.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +3

Query: 6   DCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 122
           DCHEATKFISKVY REIIVRDR+R+HH +DG CSCKDYW
Sbjct: 507 DCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 545


>ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 624

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +3

Query: 6   DCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 122
           DCHEATKFISKVY REIIVRDR+R+HH +DG CSCKDYW
Sbjct: 586 DCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624


>emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
          Length = 539

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +3

Query: 6   DCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 122
           DCHEATKFISKVY REIIVRDR+R+HH +DG CSCKDYW
Sbjct: 501 DCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 539


>ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
           gi|195609890|gb|ACG26775.1| selenium-binding
           protein-like [Zea mays]
          Length = 605

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +3

Query: 6   DCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 122
           DCHEATKF+S+V+ R+I+VRDR RFHH +DGQCSCKDYW
Sbjct: 567 DCHEATKFVSRVFERQIVVRDRNRFHHFKDGQCSCKDYW 605


>gb|ACF82562.1| unknown [Zea mays] gi|413957085|gb|AFW89734.1| selenium-binding
           protein-like protein [Zea mays]
          Length = 605

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +3

Query: 6   DCHEATKFISKVYNREIIVRDRLRFHHVRDGQCSCKDYW 122
           DCHEATKF+S+V+ R+I+VRDR RFHH +DGQCSCKDYW
Sbjct: 567 DCHEATKFVSRVFERQIVVRDRNRFHHFKDGQCSCKDYW 605


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