BLASTX nr result

ID: Coptis21_contig00019476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019476
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615575.1| Laccase 1a [Medicago truncatula] gi|35551691...    67   1e-09
ref|XP_002280416.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297...    66   3e-09
ref|XP_003544873.1| PREDICTED: laccase-4-like [Glycine max]            65   4e-09
ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|2235...    65   4e-09
ref|XP_003551299.1| PREDICTED: laccase-4-like [Glycine max]            65   6e-09

>ref|XP_003615575.1| Laccase 1a [Medicago truncatula] gi|355516910|gb|AES98533.1|
           Laccase 1a [Medicago truncatula]
          Length = 593

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/90 (45%), Positives = 50/90 (55%), Gaps = 24/90 (26%)
 Frame = -2

Query: 202 SNCNTN-----YQLAYNTVVQVVLQDKGIIAPECHPIYLHSFN----------------- 89
           SN  TN     Y+LAYN+ VQ++LQD G+IAPE HPI+LH FN                 
Sbjct: 460 SNFRTNKGTRVYRLAYNSTVQLILQDTGMIAPENHPIHLHGFNFFVVGKGQGNFNPKKDT 519

Query: 88  --*ENLDPVKRNTKRVPYARRSAIRFRIDN 5
                +DPV+RNT  VP    +AIRFR DN
Sbjct: 520 KKFNLVDPVERNTVGVPSGGWTAIRFRADN 549


>ref|XP_002280416.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297745946|emb|CBI16002.3|
           unnamed protein product [Vitis vinifera]
          Length = 554

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/79 (46%), Positives = 46/79 (58%), Gaps = 19/79 (24%)
 Frame = -2

Query: 184 YQLAYNTVVQVVLQDKGIIAPECHPIYLHSFN-------------------*ENLDPVKR 62
           Y+LAYN+ VQ+VLQD G+IAPE HP++LH FN                      +DPV+R
Sbjct: 432 YRLAYNSTVQLVLQDTGMIAPERHPVHLHGFNFFVIGRGLGNYNPKKDPKKFNLVDPVER 491

Query: 61  NTKRVPYARRSAIRFRIDN 5
           NT  VP    +AIRFR DN
Sbjct: 492 NTVGVPSGGWTAIRFRADN 510


>ref|XP_003544873.1| PREDICTED: laccase-4-like [Glycine max]
          Length = 554

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 40/90 (44%), Positives = 49/90 (54%), Gaps = 24/90 (26%)
 Frame = -2

Query: 202 SNCNTN-----YQLAYNTVVQVVLQDKGIIAPECHPIYLHSFN----------------- 89
           +N  TN     Y+LAYN+ VQ+VLQD G+I PE HPI+LH FN                 
Sbjct: 421 TNLRTNRGTRVYRLAYNSTVQLVLQDTGMITPENHPIHLHGFNFFVVGRGQGNFNPKKDT 480

Query: 88  --*ENLDPVKRNTKRVPYARRSAIRFRIDN 5
                +DPV+RNT  VP    +AIRFR DN
Sbjct: 481 KKFNLVDPVERNTVGVPSGGWTAIRFRADN 510


>ref|XP_002520425.1| laccase, putative [Ricinus communis] gi|223540267|gb|EEF41838.1|
           laccase, putative [Ricinus communis]
          Length = 556

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/79 (46%), Positives = 45/79 (56%), Gaps = 19/79 (24%)
 Frame = -2

Query: 184 YQLAYNTVVQVVLQDKGIIAPECHPIYLHSF-------------------N*ENLDPVKR 62
           Y+LAYN+ VQ+VLQD G+I PE HPI+LH F                   N   +DPV+R
Sbjct: 434 YRLAYNSTVQLVLQDTGMITPENHPIHLHGFNFFQVGRGVGNFNPKKDPKNFNLVDPVER 493

Query: 61  NTKRVPYARRSAIRFRIDN 5
           NT  VP    +AIRFR DN
Sbjct: 494 NTAGVPSGGWTAIRFRADN 512


>ref|XP_003551299.1| PREDICTED: laccase-4-like [Glycine max]
          Length = 556

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/79 (46%), Positives = 45/79 (56%), Gaps = 19/79 (24%)
 Frame = -2

Query: 184 YQLAYNTVVQVVLQDKGIIAPECHPIYLHSFN-------------------*ENLDPVKR 62
           Y+LAYN+ VQ+VLQD G+I PE HPI+LH FN                      +DPV+R
Sbjct: 434 YRLAYNSTVQLVLQDTGMITPENHPIHLHGFNFFVVGRGQRNFNPTKDPKKFNLVDPVER 493

Query: 61  NTKRVPYARRSAIRFRIDN 5
           NT  VP    +AIRFR DN
Sbjct: 494 NTVGVPAGGWTAIRFRTDN 512


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