BLASTX nr result

ID: Coptis21_contig00019442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019442
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171616.1| PREDICTED: 40S ribosomal protein S21-2-like ...   137   1e-30
ref|XP_004143089.1| PREDICTED: 40S ribosomal protein S21-2-like ...   137   1e-30
emb|CAN60816.1| hypothetical protein VITISV_033219 [Vitis vinifera]   136   2e-30
ref|XP_002283649.1| PREDICTED: 40S ribosomal protein S21 isoform...   135   3e-30
gb|AEC10964.1| 40S ribosomal protein s21e [Camellia sinensis]         135   3e-30

>ref|XP_004171616.1| PREDICTED: 40S ribosomal protein S21-2-like isoform 2 [Cucumis
           sativus]
          Length = 82

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/72 (87%), Positives = 71/72 (98%)
 Frame = +1

Query: 34  MQNEEGQQTDLYIPRKCSATNRLITSKDHASVQINVGHLNEHGMYTGKFSTFALCGYIRA 213
           MQNEEG+ T+LYIPRKCSATNRLITSKDHASVQIN+GHL+E+G+YTG+FSTFALCG+IRA
Sbjct: 1   MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 214 QGDADSALDRLW 249
           QGDADSALDRLW
Sbjct: 61  QGDADSALDRLW 72


>ref|XP_004143089.1| PREDICTED: 40S ribosomal protein S21-2-like [Cucumis sativus]
          Length = 82

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/72 (87%), Positives = 71/72 (98%)
 Frame = +1

Query: 34  MQNEEGQQTDLYIPRKCSATNRLITSKDHASVQINVGHLNEHGMYTGKFSTFALCGYIRA 213
           MQNEEG+ T+LYIPRKCSATNRLITSKDHASVQIN+GHL+E+G+YTG+FSTFALCG+IRA
Sbjct: 1   MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 214 QGDADSALDRLW 249
           QGDADSALDRLW
Sbjct: 61  QGDADSALDRLW 72


>emb|CAN60816.1| hypothetical protein VITISV_033219 [Vitis vinifera]
          Length = 82

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/72 (87%), Positives = 68/72 (94%)
 Frame = +1

Query: 34  MQNEEGQQTDLYIPRKCSATNRLITSKDHASVQINVGHLNEHGMYTGKFSTFALCGYIRA 213
           MQNEEGQ  DLYIPRKCSATNRLITSKDHASVQINVGHL+E G YTG+F+TFALCG++RA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINVGHLDESGTYTGQFTTFALCGFVRA 60

Query: 214 QGDADSALDRLW 249
           QGDADSALDRLW
Sbjct: 61  QGDADSALDRLW 72


>ref|XP_002283649.1| PREDICTED: 40S ribosomal protein S21 isoform 1 [Vitis vinifera]
           gi|296089706|emb|CBI39525.3| unnamed protein product
           [Vitis vinifera]
          Length = 82

 Score =  135 bits (341), Expect = 3e-30
 Identities = 62/72 (86%), Positives = 68/72 (94%)
 Frame = +1

Query: 34  MQNEEGQQTDLYIPRKCSATNRLITSKDHASVQINVGHLNEHGMYTGKFSTFALCGYIRA 213
           MQNEEGQ  DLYIPRKCSATNRLITSKDHASVQIN+GHL+E G YTG+F+TFALCG++RA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINIGHLDESGTYTGQFTTFALCGFVRA 60

Query: 214 QGDADSALDRLW 249
           QGDADSALDRLW
Sbjct: 61  QGDADSALDRLW 72


>gb|AEC10964.1| 40S ribosomal protein s21e [Camellia sinensis]
          Length = 82

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/72 (84%), Positives = 70/72 (97%)
 Frame = +1

Query: 34  MQNEEGQQTDLYIPRKCSATNRLITSKDHASVQINVGHLNEHGMYTGKFSTFALCGYIRA 213
           MQNEEGQ  DLYIPRKCSATNRLIT+KDHASVQINVGHL+E+G+YTG+F+TFALCG++RA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITAKDHASVQINVGHLDENGIYTGQFTTFALCGFVRA 60

Query: 214 QGDADSALDRLW 249
           QGDADSA+DRLW
Sbjct: 61  QGDADSAVDRLW 72


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