BLASTX nr result

ID: Coptis21_contig00019440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019440
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like ...   258   1e-66
emb|CBI40843.3| unnamed protein product [Vitis vinifera]              258   1e-66
emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]   254   2e-65
ref|XP_003563291.1| PREDICTED: elongator complex protein 4-like ...   254   3e-65
ref|XP_002533644.1| conserved hypothetical protein [Ricinus comm...   254   3e-65

>ref|XP_002267851.2| PREDICTED: elongator complex protein 4-like [Vitis vinifera]
          Length = 361

 Score =  258 bits (660), Expect = 1e-66
 Identities = 133/184 (72%), Positives = 148/184 (80%)
 Frame = -3

Query: 1040 DLRKPLKVPSLGAQRIHCFSILESPNLTAFRDRCSTFLAQVPRNDKGIGCAGRIAIQSLC 861
            DLRKPL+   L AQ I C SI + PNL AFRD C+ FLAQ  RN+  I CAGR+AIQS C
Sbjct: 154  DLRKPLERYFLTAQNICCLSIQDPPNLAAFRDCCAKFLAQFSRNNSSISCAGRVAIQSFC 213

Query: 860  APQCGYSDTEWDVLSFIRFLKSMLRSSNAVAVITFXXXXXXXXXSKRWQHMADTLLSVRA 681
            APQC YS+ EWD+LSFIR LK M+R SNAVAVITF         SKRWQH+ADTLLSV+A
Sbjct: 214  APQCEYSNMEWDMLSFIRSLKGMIRDSNAVAVITFPPSLLSPSSSKRWQHIADTLLSVKA 273

Query: 680  IPDEDKDLANLLTGYQDMVGLLHVHKVAQINTQVPVILDANTFSIKLQRRRSLVLERLNQ 501
            IPDEDK+LANLLTGYQDMVGLL+VHKVA +NTQVPVIL+A TFSIKLQ+RR LVLE LNQ
Sbjct: 274  IPDEDKELANLLTGYQDMVGLLNVHKVANVNTQVPVILEATTFSIKLQKRRYLVLECLNQ 333

Query: 500  APVD 489
            APVD
Sbjct: 334  APVD 337


>emb|CBI40843.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  258 bits (660), Expect = 1e-66
 Identities = 133/184 (72%), Positives = 148/184 (80%)
 Frame = -3

Query: 1040 DLRKPLKVPSLGAQRIHCFSILESPNLTAFRDRCSTFLAQVPRNDKGIGCAGRIAIQSLC 861
            DLRKPL+   L AQ I C SI + PNL AFRD C+ FLAQ  RN+  I CAGR+AIQS C
Sbjct: 155  DLRKPLERYFLTAQNICCLSIQDPPNLAAFRDCCAKFLAQFSRNNSSISCAGRVAIQSFC 214

Query: 860  APQCGYSDTEWDVLSFIRFLKSMLRSSNAVAVITFXXXXXXXXXSKRWQHMADTLLSVRA 681
            APQC YS+ EWD+LSFIR LK M+R SNAVAVITF         SKRWQH+ADTLLSV+A
Sbjct: 215  APQCEYSNMEWDMLSFIRSLKGMIRDSNAVAVITFPPSLLSPSSSKRWQHIADTLLSVKA 274

Query: 680  IPDEDKDLANLLTGYQDMVGLLHVHKVAQINTQVPVILDANTFSIKLQRRRSLVLERLNQ 501
            IPDEDK+LANLLTGYQDMVGLL+VHKVA +NTQVPVIL+A TFSIKLQ+RR LVLE LNQ
Sbjct: 275  IPDEDKELANLLTGYQDMVGLLNVHKVANVNTQVPVILEATTFSIKLQKRRYLVLECLNQ 334

Query: 500  APVD 489
            APVD
Sbjct: 335  APVD 338


>emb|CAN76747.1| hypothetical protein VITISV_011445 [Vitis vinifera]
          Length = 363

 Score =  254 bits (649), Expect = 2e-65
 Identities = 131/184 (71%), Positives = 146/184 (79%)
 Frame = -3

Query: 1040 DLRKPLKVPSLGAQRIHCFSILESPNLTAFRDRCSTFLAQVPRNDKGIGCAGRIAIQSLC 861
            DLRKPL+   L AQ I C SI + PNL A RD C+ FLAQ  RN+  I CAGR+AIQS C
Sbjct: 156  DLRKPLERXFLTAQNICCLSIQDPPNLAAXRDCCAKFLAQFSRNNSSISCAGRVAIQSFC 215

Query: 860  APQCGYSDTEWDVLSFIRFLKSMLRSSNAVAVITFXXXXXXXXXSKRWQHMADTLLSVRA 681
            APQC YS+ EWD+LSFIR LK M+R  NAVAVITF         SKRWQH+ADTLLSV+A
Sbjct: 216  APQCEYSNMEWDMLSFIRSLKGMIRDLNAVAVITFPPSLLSPSSSKRWQHIADTLLSVKA 275

Query: 680  IPDEDKDLANLLTGYQDMVGLLHVHKVAQINTQVPVILDANTFSIKLQRRRSLVLERLNQ 501
            IPDEDK+LANLLTGYQDMVGLL+VHKVA +NTQVPVIL+A TFSIKLQ+RR LVLE LNQ
Sbjct: 276  IPDEDKELANLLTGYQDMVGLLNVHKVANVNTQVPVILEATTFSIKLQKRRYLVLECLNQ 335

Query: 500  APVD 489
            APVD
Sbjct: 336  APVD 339


>ref|XP_003563291.1| PREDICTED: elongator complex protein 4-like [Brachypodium distachyon]
          Length = 382

 Score =  254 bits (648), Expect = 3e-65
 Identities = 128/184 (69%), Positives = 149/184 (80%)
 Frame = -3

Query: 1040 DLRKPLKVPSLGAQRIHCFSILESPNLTAFRDRCSTFLAQVPRNDKGIGCAGRIAIQSLC 861
            DLRKPL+   L AQ I C S  +  NL+  +DRCSTFL+++PR D G   AG+IAIQSLC
Sbjct: 175  DLRKPLERHLLNAQHIECLSTQDVDNLSDLQDRCSTFLSKLPRKDGGTLNAGQIAIQSLC 234

Query: 860  APQCGYSDTEWDVLSFIRFLKSMLRSSNAVAVITFXXXXXXXXXSKRWQHMADTLLSVRA 681
            APQCGY   +WD++SFIR LKSM+RSSNAVAVITF          KRWQH+ADTLLS++A
Sbjct: 235  APQCGYFGKDWDMVSFIRSLKSMVRSSNAVAVITFPYTVLSNSFCKRWQHLADTLLSIKA 294

Query: 680  IPDEDKDLANLLTGYQDMVGLLHVHKVAQINTQVPVILDANTFSIKLQRRRSLVLERLNQ 501
            IPDEDKDLA LLTGYQDMVG LHVHKVAQ N+QVPVIL+A+TFS+KL++RRSLVLERLNQ
Sbjct: 295  IPDEDKDLAKLLTGYQDMVGFLHVHKVAQTNSQVPVILEASTFSLKLRKRRSLVLERLNQ 354

Query: 500  APVD 489
            APVD
Sbjct: 355  APVD 358


>ref|XP_002533644.1| conserved hypothetical protein [Ricinus communis]
            gi|223526457|gb|EEF28732.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 363

 Score =  254 bits (648), Expect = 3e-65
 Identities = 127/184 (69%), Positives = 145/184 (78%)
 Frame = -3

Query: 1040 DLRKPLKVPSLGAQRIHCFSILESPNLTAFRDRCSTFLAQVPRNDKGIGCAGRIAIQSLC 861
            DLRKPL+      QR+ C S+ +SPNL   +DRCS FLAQ PRND GI   GRIAIQSLC
Sbjct: 156  DLRKPLERHFFSGQRVDCVSVNDSPNLATLQDRCSAFLAQFPRNDGGISSIGRIAIQSLC 215

Query: 860  APQCGYSDTEWDVLSFIRFLKSMLRSSNAVAVITFXXXXXXXXXSKRWQHMADTLLSVRA 681
            APQC YS+ EW+VLSFIR LKSMLRS+NAVAVITF          KRWQHM+D LLSV+A
Sbjct: 216  APQCEYSNKEWEVLSFIRSLKSMLRSANAVAVITFPPSLLSDSFCKRWQHMSDILLSVKA 275

Query: 680  IPDEDKDLANLLTGYQDMVGLLHVHKVAQINTQVPVILDANTFSIKLQRRRSLVLERLNQ 501
            IPD+DK+LA LLTGYQDM+G L+VHKV +INTQVP+ILDA TFSIKL +RR LVLE LNQ
Sbjct: 276  IPDDDKELAKLLTGYQDMIGFLNVHKVVRINTQVPLILDATTFSIKLHKRRYLVLECLNQ 335

Query: 500  APVD 489
            AP+D
Sbjct: 336  APID 339


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