BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00019438
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat...    65   5e-09
ref|XP_002530218.1| conserved hypothetical protein [Ricinus comm...    65   7e-09
ref|XP_003625282.1| FAR1-related protein [Medicago truncatula] g...    64   1e-08
emb|CBI28440.3| unnamed protein product [Vitis vinifera]               64   1e-08
emb|CAN79288.1| hypothetical protein VITISV_044035 [Vitis vinifera]    64   1e-08

>ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
 Frame = +3

Query: 93   LSLSIKSSAAVLT*RKQFKLG---AFYLFEMEGNVGAVDGSSSRCTDSQSKDVEILVAPH 263
            L +++K S  +   R+Q   G    +  +E +    A        T S S   E++  P+
Sbjct: 1043 LKMAMKPSNNIWIRRQQCPCGDWKCYIKYEGDDQTSANSQLVKSETSSSSLASEVVFTPY 1102

Query: 264  LGMKFNSVDEAKTYYREFGKQEGFEIR-VRTTDKKQTGVELPSSCLLVCSREGVHNKKEE 440
            +G  F S DEA  YY  F ++ GF IR  R+T+ +  G+        VC R G +  +++
Sbjct: 1103 VGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRD---FVCYRSGFNQPRKK 1159

Query: 441  GEGVASRNTSTVRCGCQARMRVTKRKLENI 530
                  R+  +VRCGC A++ +TK  ++ +
Sbjct: 1160 ANVEHPRDRKSVRCGCDAKLYLTKEIVDGV 1189


>ref|XP_002530218.1| conserved hypothetical protein [Ricinus communis]
           gi|223530265|gb|EEF32165.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 651

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = +3

Query: 219 TDSQSKDVEILVAPHLGMKFNSVDEAKTYYREFGKQEGFEIR-VRTTDKKQTGVELPSSC 395
           T S S   E++  P++G  F S D+A  YY  F ++ GF IR  R+T+ +  GV      
Sbjct: 44  TPSTSSSTEVVFTPYVGQIFRSDDDAFEYYSNFARKNGFSIRKARSTESQNLGVYRRD-- 101

Query: 396 LLVCSREGVHNKKEEGEGVASRNTSTVRCGCQARMRVTKRKLENI 530
             VC R G +  +++      R+  +VRCGC A++ +TK  ++ +
Sbjct: 102 -FVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVDGV 145


>ref|XP_003625282.1| FAR1-related protein [Medicago truncatula]
           gi|355500297|gb|AES81500.1| FAR1-related protein
           [Medicago truncatula]
          Length = 309

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/87 (36%), Positives = 54/87 (62%)
 Frame = +3

Query: 258 PHLGMKFNSVDEAKTYYREFGKQEGFEIRVRTTDKKQTGVELPSSCLLVCSREGVHNKKE 437
           P +GM+F++++EAK ++  +G + GF IRVR T+KK+ G    +SC LVC +EG+ NK  
Sbjct: 10  PEVGMRFDNMEEAKQFWLAYGLRVGFGIRVRFTNKKKDG--SVTSCRLVCCKEGLKNKGN 67

Query: 438 EGEGVASRNTSTVRCGCQARMRVTKRK 518
           +         + +R  C AR+ +++ K
Sbjct: 68  KNAYEGKYERADIRTNCLARITLSRCK 94


>emb|CBI28440.3| unnamed protein product [Vitis vinifera]
          Length = 1355

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = +3

Query: 219 TDSQSKDVEILVAPHLGMKFNSVDEAKTYYREFGKQEGFEIR-VRTTDKKQTGVELPSSC 395
           T S S   E++  P++G  F S DEA  YY  F ++ GF IR  R+T+ +  G+      
Sbjct: 44  TSSSSLASEVVFTPYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRD-- 101

Query: 396 LLVCSREGVHNKKEEGEGVASRNTSTVRCGCQARMRVTKRKLENI 530
             VC R G +  +++      R+  +VRCGC A++ +TK  ++ +
Sbjct: 102 -FVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVDGV 145


>emb|CAN79288.1| hypothetical protein VITISV_044035 [Vitis vinifera]
          Length = 692

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
 Frame = +3

Query: 219 TDSQSKDVEILVAPHLGMKFNSVDEAKTYYREFGKQEGFEIR-VRTTDKKQTGVELPSSC 395
           T S S   E++  P++G  F S DEA  YY  F ++ GF IR  R+T+ +  G+      
Sbjct: 44  TSSSSLASEVVFTPYVGQIFKSDDEAFEYYSNFARKNGFSIRKARSTESQNLGIYRRD-- 101

Query: 396 LLVCSREGVHNKKEEGEGVASRNTSTVRCGCQARMRVTKRKLENI 530
             VC R G +  +++      R+  +VRCGC A++ +TK  ++ +
Sbjct: 102 -FVCYRSGFNQPRKKANVEHPRDRKSVRCGCDAKLYLTKEIVDGV 145